Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq6160 170 4e-40 >seq6160 Length=10982 Score = 170 bits (188), Expect = 4e-40 Identities = 164/208 (79%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| || ||| || || | || |||||||||||| || ||||| |||||| ||| Sbjct 5709 TTTACAACCCTAAGGCCGTCAT-CAATCACGCGGCATTG-CTCCATCAGACTTTCGTCCA 5652 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| || |||||| |||||||||||||||||||||| || |||||||||||| || | Sbjct 5651 TTGTGGAAAATTCCCTACTGCTGCCTCCCGTAGGAGTCCGGGCCGTGTCTCAGTCCCGAT 5592 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | | ||| |||||||| | | |||| ||| |||||||| || |||||| ||| Sbjct 5591 GTGGCCGTTCACCCTCTCAGGTCGGCTACGTATCAAAGCCTTGGTAGGCTATTACCCCAC 5532 Query 182 CAACTAGCTAATCCGACCTAGGCTCATC 209 |||||||||||| || | | |||||| Sbjct 5531 CAACTAGCTAATACGCCGCATTCTCATC 5504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1070166311840