Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq6160 246 8e-63 >seq6160 Length=10982 Score = 246 bits (272), Expect = 8e-63 Identities = 300/395 (76%), Gaps = 17/395 (4%) Strand=Plus/Minus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 ||||||||| || ||||||||||||| | ||| |||| | | ||| |||||||| | Sbjct 7846 TTTTCAACGCCCGTGTGTTCGGTCCTCCATTAAGT-GTTATCTTAACTT-CAACCTGCTC 7789 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGAC 149 || || |||||| || ||||| |||||||| | | | ||| |||||||| |||| | Sbjct 7788 AT-GGTTAGATCACCTGGTTT-CGGGTCTACTACA-ATATACTCAACGCCCTATTAAGGC 7732 Query 150 TCGCTTTTCGCTACGCCTCCCCTATTCGG---TTAAGCTTTGCCACTGAAAATAAGTCGC 206 ||||||| | ||||| |||| | || |||| ||| || | | | ||| |||| Sbjct 7731 TCGCTTT-CACTACGGCTCCGTTTTTTAAAACTTAACCTT-GCATATTATAGTAACTCGC 7674 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 | | |||| ||||||||| |||| ||||||| || | ||||| ||| |||||| | Sbjct 7673 CGGCTCATTCTACAAAAGGCACGCTATCACCCATTAACG--GGCTCTAACTTCTTGTAAG 7616 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 ||||| ||||||||| |||||||||||||||| | ||||| |||||| |||||||||||| Sbjct 7615 CATACAGTTTCAGGAACTATTTCACTCCCCTCAC-GGGGTACTTTTCACCTTTCCCTCAC 7557 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT--GGAGGATGGTCCCCCCA 384 |||||| |||||||||||| | | ||||||||||||||| | || ||||| | | Sbjct 7556 GGTACTGTTTCACTATCGGTGAATAGGTAGTATTTAGCCTTACGCAG--TGGTCTGCGTA 7499 Query 385 TATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||| |||||| ||||||||| | || | ||||| Sbjct 7498 GATTCCGACAAAATTTCTCGTGTTTCGCCGTACTC 7464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1239476205952