Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq6160 212 1e-52 >seq6160 Length=10982 Score = 212 bits (234), Expect = 1e-52 Identities = 237/315 (75%), Gaps = 9/315 (3%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| |||||| |||| |||||||| || || ||| ||||||||||||||||| Sbjct 5678 GGCATTGCTCCATCAGACTTTCGTCCATTGTGGAAAATTCCCTACTGCTGCCTCCCGTAG 5619 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||| || Sbjct 5618 GAGTCCGGGCCGTGTCTCAGTCCCGATGTGGCCGTTCACCCTCTCAGGTCGGCTACGTAT 5559 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | |||||| |||||||| | ||||||||| ||||| ||||| | |||| || Sbjct 5558 CAAAGCCTTGGTAGGCTATTACCCCACCAACTAGCTAATACGCCGCATTCTCATCCACCA 5499 Query 181 GCGATAAATCTT-------TGGTCAAAGAATGATGCCATC-CTCT-GACATTATGCGGTA 231 | | | || || |||| | || ||| ||| | | | ||||||||||| Sbjct 5498 GTGGTGCATTTTACAGCACCTTTCAATGTATTATGTTATCACAATACATATTATGCGGTA 5439 Query 232 TTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCA 291 ||||| ||||||| ||||| || |||||| ||||| || |||||||||||| Sbjct 5438 TTAGCAACCGTTTCCGGTTGTTATCCCCCTCTGATGGGCAGATTAAATACGTGTTACTCA 5379 Query 292 CCCGTCCGCCACTAA 306 ||||| ||||||||| Sbjct 5378 CCCGTTCGCCACTAA 5364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 996692206848