Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq6160 212 1e-52 >seq6160 Length=10982 Score = 212 bits (234), Expect = 1e-52 Identities = 299/409 (73%), Gaps = 21/409 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| || |||| |||| ||| ||| ||| | || Sbjct 8460 CGACTACGCCTTTCGGCCTCGCCTTAGGTCCTGACTAACCCTGGGTGGACGAACCTTGCC 8401 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | |||| ||||| ||||||| |||||| |||| ||| || |||||||||| | Sbjct 8400 CAGGAAACCTTGTTCAATCGGCATGAAGGATTCTCACCT-TCAATCGTTACTCATGCCGG 8342 Query 121 CATTCTCACTCGCATCAAC--TCCACCACACAGTCACC-CGGC--AGCTTCA--CCACTG 173 |||||||||| | ||| |||| |||||| | ||| | ||||| || | Sbjct 8341 CATTCTCACTTCTA--AACGGTCCA----ACAGTCCTCACGGTCTATCTTCATTCCCTTT 8288 Query 174 ACACGACGCTCCCCTACCCAACCACACAGGTTGCCACAGCTTCGGCGGATAA--CTTAAG 231 | | ||||||||||||| | | || || ||| |||||||| || | |||||| Sbjct 8287 AGA--ACGCTCCCCTACCGCCCAATACTGGAC-CCATAGCTTCGGT--ATTATTCTTAAG 8233 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| |||||| | | || || |||||||| |||| ||| |||||| ||||| || Sbjct 8232 CCCCGGTACATTTTAAGTGCAAAACCACTTGACTAGTGGGCTGTTACGCGATCTTTAAAT 8173 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 |||||||||||| |||||||| |||| | ||| || ||| | ||| | || | |||| Sbjct 8172 GATGGCTGCTTCTAAGCCAACATCCTAGCTGTTTAAGCAGTTTCACCGCTTTACACACTT 8113 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || | || ||| |||||||||||| ||||||||||||||||| || Sbjct 8112 AGAATAAATTTGGGGACCTTAGCTGATGGTCTGGGCTGTTTCCCTCGCG 8064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175585679872