Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq6160 325 6e-87 >seq6160 Length=10982 Score = 325 bits (360), Expect = 6e-87 Identities = 228/260 (88%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| |||||| || | ||| ||||||||||| |||||| Sbjct 9839 GCTTAGATGCTTTCAGCGATTATCACTTCCATACATGGCTACCCAGCTATGCCATTGGCA 9780 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 |||||||| ||||||||||| |||||| |||||||||||||||||| || |||| | | Sbjct 9779 TGACAACTGGCGCACCAGAGGTATGTCCACCCCGGTCCTCTCGTACTAGGGGCAGCGCTT 9720 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 |||||||||||||||||||| || |||||||| | ||||||||| ||||||||||||||| Sbjct 9719 CTCAAATTTCCTACGCCCACAACAGATAGGGAACAAACTGTCTCACGACGTTCTGAACCC 9660 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||||||| || ||||||||||||||||||||||||||||| ||| ||| |||| |||| Sbjct 9659 AGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACCAACTACAGCTCCAG 9600 Query 256 GATGAGACGAGCCGACATCG 275 |||| || |||||||||||| Sbjct 9599 GATGCGATGAGCCGACATCG 9580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779506155108