Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq6160 221 3e-55 >seq6160 Length=10982 Score = 221 bits (244), Expect = 3e-55 Identities = 305/425 (72%), Gaps = 34/425 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| |||||| || ||| |||||||||| ||| |||||| ||| || ||||| Sbjct 5709 TTTACAACCCTAAGGCCGTCATCAATCACGCGGCATTGCTCCATCAGACTTTCGTCCATT 5650 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 ||| || |||||| |||||||||||||||||||||| || |||||||||||| || ||| Sbjct 5649 GTGGAAAATTCCCTACTGCTGCCTCCCGTAGGAGTCCGGGCCGTGTCTCAGTCCCGATGT 5590 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| | ||| |||||||| | |||| | ||| |||| ||| ||| |||||||| ||| Sbjct 5589 GGCCGTTCACCCTCTCAGGTCGGCTACGTATCAAAGCCTTGGTAGGCTATTACCCCACCA 5530 Query 185 ACTAGCTAATCCCATCTGGGT--TCATCCGATAGTG----AGAGGCCCGAAGGTCCCCCT 238 |||||||||| | | | | |||||| |||| | | | | | | | Sbjct 5529 ACTAGCTAATAC--GCCGCATTCTCATCCACCAGTGGTGCATTTTACAGCACCTTTCAAT 5472 Query 239 CTTTGGTCTTGCGAC-------GTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCC 291 | | | || || ||||||||||||||| ||||||||| || |||||||| Sbjct 5471 GTATTATGTTATCACAATACATATTATGCGGTATTAGCAACCGTTTCCGGTTGTTATCCC 5412 Query 292 CCTCCATCAGGCAGTTTCCCAGAC--ATTACTCACCCGTCCGCCACTCGTCAGCGAAGCA 349 |||| ||||| || | || |||||||||||| ||||||| || ||||| Sbjct 5411 CCTCTGATGGGCAGATT-AAATACGTGTTACTCACCCGTTCGCCACTAAACACCGAAG-- 5355 Query 350 GCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAAT 409 |||| ||||||||||||||||| |||||| |||||| |||||||| Sbjct 5354 -------------TGTT-CCGTTCGACTTGCATGTATTAGGCATGCCGCTAGCGTTCATC 5309 Query 410 CTGAG 414 ||||| Sbjct 5308 CTGAG 5304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1220309048128