Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq6160 347 3e-93 >seq6160 Length=10982 Score = 347 bits (384), Expect = 3e-93 Identities = 322/408 (79%), Gaps = 9/408 (2%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| ||| || ||||| |||||||||| |||||||||||||||||||||| |||| ||| Sbjct 5763 TACCTGATCAGAAAGCCACGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGTGGC 5822 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||||||||| ||| ||||||||||| |||||||| ||| | ||||| ||||| Sbjct 5823 AAGCGTTATCCGGATTTATTGGGCGTAAAGCGTGCGTAGACGGTATAGTAAGTTTGAGGT 5882 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 |||| || ||||||||||| | | ||| || ||||| ||||| |||||||| Sbjct 5883 TAAAGTCTGGGGCTCAACCCCAGTA-TGCCTTGAAAACTATTAAACTAGAATGCAGGAGA 5941 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || | ||||||||| |||||||||| ||||||||||||| ||||||||||||| || Sbjct 5942 GGTTAATGGAATTCCATATGTAGCGGTGGAATGCGTAGATATATGGAGGAACACCAGGGG 6001 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 ||||||||| | | | |||| | |||| | || ||||||||||||||||||| || Sbjct 6002 CGAAGGCGGTTAACCAGCCTGTTATTGACGTTTCAGCACGAAAGCGTGGGGAGCAAATAG 6061 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAA 360 ||||||||||||| ||||||||||| ||||||||||| ||||| |||||| | Sbjct 6062 GATTAGATACCCTAGTAGTCCACGCTGTAAACGATGAGTACTAAGTGTCG--------AT 6113 Query 361 GTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || |||||| ||||| |||||| |||||| ||| |||| | |||| Sbjct 6114 GTTAATCGGTGCTGCAGCTAACGCATTAAGTACTCCGCCTGAGTAGTA 6161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201141890304