Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq6160 289 1e-75 >seq6160 Length=10982 Score = 289 bits (320), Expect = 1e-75 Identities = 414/575 (72%), Gaps = 15/575 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||||||||| |||| |||| | ||| | | || | ||| || || | | Sbjct 9445 TCGACTTGTAAGTCTCACAGTTAAGCACACTTCTACCTTTGCGCTCTACATACGACTTCT 9386 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| |||| | ||||||| |||||||||||| ||| ||||| | |||||||||| Sbjct 9385 AACCGTATTGAGTGTACCTTTGAACGCCTCCGTTACTGTTTAGGAGG-CGACCGCCCCAG 9327 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||| ||| |||||||||| ||| ||| | | | |||||||| |||| Sbjct 9326 TCAAACTACCCATCAGACACTGTCCCCGACCTGGATAACAGATCTAGGTTAGA-ATCCTA 9268 Query 181 TACGGTCA-GAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | || | |||||||| ||| ||||| | ||| |||| |||| || Sbjct 9267 AAATAACAAGGGTGGTATTCCAAGGGTAACTCCCTACTAACTGGCGTCAATAGATCAAAG 9208 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 | |||||||||||||| ||| || || ||||| ||| | |||| ||| ||| Sbjct 9207 TTTCCCACCTATCCTATACATGTTATTCCAAAATTCAATATCAAATTGTAGTAAAGCTCC 9148 Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 ||||||||| |||| || ||| | ||| ||||||| || ||||| ||||||||| Sbjct 9147 ATGGGGTCTTTCCGTCTTGTTGCGGGTAACCTGCATCTTCACAGGTACTAAAATTTCACC 9088 Query 359 GGGCCTGTGGTTGAGACAGC-AGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || | | |||||||| | |||| || ||| || ||||||| |||| |||||||| Sbjct 9087 GAGTCTATAGCCGAGACAGCGAAGGGA-TCATTATACCTTTCGTGCGGGTCAGAACTTAC 9029 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 | ||||||||||||||||||||||||| ||||||||||| |||||||| || ||||| Sbjct 9028 CTGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCAGGGCT 8969 Query 478 TCAATTACCCGCCTC---ACACACCA------CGTGGTGTGCTCACGAGTCCTCTTAACC 528 |||||| || || || | | | | ||| || || |||||||||||| Sbjct 8968 TCAATTTCCTGCTTCGTTAGAAAGAATTAAATCGTTAATAACTAACAGGTCCTCTTAACC 8909 Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 |||| |||| |||||||| ||| || ||||| || Sbjct 8908 TTCCGGCACTGGGCAGGCATCACCCCCTATACTTC 8874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1699487993728