Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq6160 134 3e-29 >seq6160 Length=10982 Score = 134 bits (148), Expect = 3e-29 Identities = 214/306 (70%), Gaps = 17/306 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACA----------AGC 50 |||||||||||| ||||||||| |||| | || |||||| || | Sbjct 5803 GGCTGCTGGCACATAGTTAGCCGTGGCTTTCTGATCAGGTACCGTCATTACTGTATCATT 5744 Query 51 TCCCACAC-GTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTC 109 ||| | || |||| ||| |||||| |||| ||| ||||||| || || || || Sbjct 5743 TCCTATACAGTGG-----TTTCTTCCCTAATAACAGATTTTTACAACCCTAAGG-CCGTC 5690 Query 110 ATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCT 169 ||| |||||| | | ||| ||||||| |||||||||| || ||||| |||||| Sbjct 5689 ATCAATCACGCGGCATTGCTCCATCAGACTTTCGTCCATTGTGGAAAATTCCCTACTGCT 5630 Query 170 GCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAA 229 ||||||||||||||| || |||||||||||| || |||||| | | |||||||| Sbjct 5629 GCCTCCCGTAGGAGTCCGGGCCGTGTCTCAGTCCCGATGTGGCCGTTCACCCTCTCAGGT 5570 Query 230 CCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATC 289 | ||| ||| || || ||| ||| ||||||| || |||| ||||| ||||| Sbjct 5569 CGGCTACGTATCAAAGCCTTGGTAGGCTATTACCCCACCAACTAGCTAATACGCCGCATT 5510 Query 290 CCCATC 295 | |||| Sbjct 5509 CTCATC 5504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1066971785536