Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq157723 150 1e-31 >seq157723 Length=4480 Score = 150 bits (166), Expect = 1e-31 Identities = 199/276 (72%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 61185 TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAA 61244 |||| ||||||||| ||| | || || |||||||| || || ||||| || || Sbjct 3286 TGAAAGACATTTCATCTCTCATATCTTAGCCTTCTTTGCTGCCAGTGATGGTATTGTGAA 3227 Query 61245 TGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTA 61304 ||| || || | || ||||| | || || || |||||| | || || ||||| || || Sbjct 3226 TGAAAACTTGGTTGAGTGTTTCTCACAAGAAGTACAAGTGCCAGAAGCTCGTTGCTTTTA 3167 Query 61305 CGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATAC 61364 || ||||| || || ||||| || |||| || |||||||| ||| | ||||| ||||| Sbjct 3166 TGGTTTCCAAATAGCAATGGAAAACATCCATTCAGAGATGTATAGTCTACTCATAGATAC 3107 Query 61365 GTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGC 61424 ||||||| ||||| | |||||| ||||| | ||||||||||| ||| | || Sbjct 3106 ATACATCAAGGAGCCAGTGGAACGAGAACGTCTCTTCAATGCCATTGAGCATCTCCCTTG 3047 Query 61425 GGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGAT 61460 || | | |||||| |||||||| || ||||||| Sbjct 3046 TGTTAGGAAGAAAGCAGATTGGGCTTTAGATTGGAT 3011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396739186635920