Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq45717 178 2e-42 seq33582 178 2e-42 seq26258 178 2e-42 seq28263 113 7e-23 seq3527 111 2e-22 seq5 84.2 3e-14 seq35711 80.6 4e-13 >seq45717 Length=6850 Score = 178 bits (196), Expect = 2e-42 Identities = 181/228 (79%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || || ||||||| ||||||||||| |||| |||||| | Sbjct 1252 GTACAAAGGGCAGGGACGTAATCGACACGAGCTT-ATGACTCGCGCCTACTGGGAATT-C 1195 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| ||| || |||| |||| ||||||| | ||||| | ||| | ||| Sbjct 1194 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCTAGCACGAAGGGGGCTCATCGGATT 1135 Query 120 ACCCGGA-CCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 || || ||||||||||| || | | || || ||| | ||||||||||||||||| Sbjct 1134 GCCTGGGTCCTGTCGGCCAGGGAGGCGACACCCGCTGATCCCTTCAGTGTAGCGCGCGTG 1075 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 1074 CGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 1028 >seq33582 Length=955 Score = 178 bits (196), Expect = 2e-42 Identities = 181/228 (79%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || || ||||||| ||||||||||| |||| |||||| | Sbjct 256 GTACAAAGGGCAGGGACGTAATCGACACGAGCTT-ATGACTCGCGCCTACTGGGAATT-C 313 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| ||| || |||| |||| ||||||| | ||||| | ||| | ||| Sbjct 314 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCTAGCACGAAGGGGGCTCATCGGATT 373 Query 120 ACCCGGA-CCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 || || ||||||||||| || | | || || ||| | ||||||||||||||||| Sbjct 374 GCCTGGGTCCTGTCGGCCAGGGAGGCGACACCCGCTGATCCCTTCAGTGTAGCGCGCGTG 433 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 434 CGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 480 >seq26258 Length=18207 Score = 178 bits (196), Expect = 2e-42 Identities = 181/228 (79%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || || ||||||| ||||||||||| |||| |||||| | Sbjct 14123 GTACAAAGGGCAGGGACGTAATCGACACGAGCTT-ATGACTCGCGCCTACTGGGAATT-C 14066 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| ||| || |||| |||| ||||||| | ||||| | ||| | ||| Sbjct 14065 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCTAGCACGAAGGGGGCTCATCGGATT 14006 Query 120 ACCCGGA-CCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 || || ||||||||||| || | | || || ||| | ||||||||||||||||| Sbjct 14005 GCCTGGGTCCTGTCGGCCAGGGAGGCGACACCCGCTGATCCCTTCAGTGTAGCGCGCGTG 13946 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 13945 CGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 13899 >seq28263 Length=100138 Score = 113 bits (124), Expect = 7e-23 Identities = 144/192 (75%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || || ||||| | ||||||||||| |||| |||| ||| Sbjct 43244 GTACAAAGGGCAGGGACGTAATCGACACGAGCAT-ATGACTCGCGCCTACTGGGAA-TTC 43187 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||| || |||| |||| ||||||| | |||| | ||| |||| Sbjct 43186 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCTAGCACGTAGGGGGCTCATCGGATT 43127 Query 120 ACC-CGGACCTGTCGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 || || ||||||||||| || | | || || ||| | ||||||||||| ||||| Sbjct 43126 GCCTGGGTCCTGTCGGCCAGGGAGGCGACACCCGCTGATCCCTTCAGTGTAGCGTGCGTG 43067 Query 178 CGGCCCAGAACA 189 |||||| | ||| Sbjct 43066 CGGCCCCGGACA 43055 >seq3527 Length=23894 Score = 111 bits (122), Expect = 2e-22 Identities = 173/239 (72%), Gaps = 20/239 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| |||||||||||||||| || || | ||||| |||||||| || |||| ||||| | Sbjct 4394 GTAAAAAGGGCAGGGACGTAATCGACACAAGCTT-ATGACTCGTGCCTACTGTGAATT-C 4337 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATT----TCAAAG 116 || ||| |||| || ||| |||| ||||||| | ||| |||| ||| | Sbjct 4336 CTTGTTCAAGAGAAATGATTACAATTTCCTATCCCTAGCAC----AAATGGGGCTCATCG 4281 Query 117 -ATTACCCGGA-CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGC 174 |||||| || ||| ||||||| | || ||| | ||||||||||| | Sbjct 4280 GATTACCTGGGTCCTATCGGCCAGGA------ACCATCTGATCCCTTCAGTGTAGCGTGT 4227 Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| |||| || ||||||||||||||||||||||| ||||| ||||| ||| ||||| Sbjct 4226 GTGTGGCCTGGA-CATCTAAGGGCATCACAGACCTGCTATTG-CTCAATCTTGGGTGGC 4170 >seq5 Length=606682 Score = 84.2 bits (92), Expect = 3e-14 Identities = 62/70 (89%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || || ||||||| ||||||||||| |||| |||| ||| Sbjct 445223 GTACAAAGGGCAGGGACGTAATCGACACGAGCTT-ATGACTCGCGCCTACTGGGAA-TTC 445166 Query 61 CTCGTTGAAG 70 |||||| ||| Sbjct 445165 CTCGTTCAAG 445156 >seq35711 Length=1949945 Score = 80.6 bits (88), Expect = 4e-13 Identities = 112/152 (74%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 77 AATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGAC-CTGTCGG 134 |||| |||| ||||||| | ||| | | ||| |||||| || || ||||| | Sbjct 1327285 AATTACAATTCCCTATCCCTAGCACAAAGGGGGCTCATAAGATTGCCTGGGTTCTGTCAG 1327344 Query 135 CCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 193 ||| || | | | || | ||| | |||||||||| ||| | |||||| | ||||||| Sbjct 1327345 CCAGGGAGGTGACACCCACTGATCCCTTCAGTGTAGCACGCATTCGGCCCCGGACATCTA 1327404 Query 194 AGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||| |||||||||||| ||||| || Sbjct 1327405 AGGGCATCACTGACCTGTTATTG-CTCAATCT 1327435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751605735800