Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq45717 95.1 7e-18 seq33582 95.1 7e-18 seq31698 95.1 7e-18 seq26258 95.1 7e-18 seq16889 95.1 7e-18 seq3416 80.6 1e-13 seq35711 75.2 6e-12 >seq45717 Length=6850 Score = 95.1 bits (104), Expect = 7e-18 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || | | |||| || ||| | | |||| || | Sbjct 719 GAACCCAAAGACTTTGGTTTCCCGGAGGCTGCCCGCCGGGTCTAGAGAGTAACGCCGGCA 660 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct 659 GATCGCCAGTCGGCATCGTTTACGGTCGGAACTAGGACGGTATCTGATCGTCTTCGA 603 >seq33582 Length=955 Score = 95.1 bits (104), Expect = 7e-18 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || | | |||| || ||| | | |||| || | Sbjct 756 GAACCCAAAGACTTTGGTTTCCCGGAGGCTGCCCGCCGGGTCTAGAGAGTAACGCCGGCA 815 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct 816 GATCGCCAGTCGGCATCGTTTACGGTCGGAACTAGGACGGTATCTGATCGTCTTCGA 872 >seq31698 Length=1061 Score = 95.1 bits (104), Expect = 7e-18 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || | | |||| || ||| | | |||| || | Sbjct 856 GAACCCAAAGACTTTGGTTTCCCGGAGGCTGCCCGCCGGGTCTAGAGAGTAACGCCGGCA 797 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct 796 GATCGCCAGTCGGCATCGTTTACGGTCGGAACTAGGACGGTATCTGATCGTCTTCGA 740 >seq26258 Length=18207 Score = 95.1 bits (104), Expect = 7e-18 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || | | |||| || ||| | | |||| || | Sbjct 13590 GAACCCAAAGACTTTGGTTTCCCGGAGGCTGCCCGCCGGGTCTAGAGAGTAACGCCGGCA 13531 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct 13530 GATCGCCAGTCGGCATCGTTTACGGTCGGAACTAGGACGGTATCTGATCGTCTTCGA 13474 >seq16889 Length=2476 Score = 95.1 bits (104), Expect = 7e-18 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || | | |||| || ||| | | |||| || | Sbjct 2184 GAACCCAAAGACTTTGGTTTCCCGGAGGCTGCCCGCCGGGTCTAGAGAGTAACGCCGGCA 2125 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct 2124 GATCGCCAGTCGGCATCGTTTACGGTCGGAACTAGGACGGTATCTGATCGTCTTCGA 2068 >seq3416 Length=585 Score = 80.6 bits (88), Expect = 1e-13 Identities = 88/117 (75%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| || ||| |||| ||||||| ||| ||| | Sbjct 76 GAACCCAAAAGCTTTGGTTTCCCGGAAGCTGCCCGCCGAGTCATCGGAGGAACGTCGGCG 135 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||| ||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 136 GATCGCTAGCTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 192 >seq35711 Length=1949945 Score = 75.2 bits (82), Expect = 6e-12 Identities = 87/115 (76%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| || ||||||||||| || | | |||| | ||| | | |||| ||| | Sbjct 1327743 GAACCCCAA-ACTTTGATTTCCCGGAGGCTGCCCATGGAGCTAGGGAG-TAACGTCGGCA 1327800 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||| | ||||||||| |||||| || |||| |||||||||||||||||||| Sbjct 1327801 GATCACCAGTCGGCATCGTTTACAGTCGGAACTAGGACGGTATCTGATCGTCTTC 1327855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278258746800