Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq45717 116 2e-24 seq26258 116 2e-24 seq23630 116 2e-24 seq28263 104 1e-20 seq33800 84.2 1e-14 >seq45717 Length=6850 Score = 116 bits (128), Expect = 2e-24 Identities = 89/105 (85%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 2556 GGAAAAGAAACTAACCAGGATTCCCCCAGTAACGGCGAGTGAAGCGGGAAGAGCCCAGCG 2615 Query 61 CCGAATCCCC---GCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||| || | | || | |||||| ||||||||| Sbjct 2616 CCGAATCCCCTCGTCCTTGTAGCGGCGGGCGGGAACTGTGGCGTA 2660 >seq26258 Length=18207 Score = 116 bits (128), Expect = 2e-24 Identities = 89/105 (85%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 15416 GGAAAAGAAACTAACCAGGATTCCCCCAGTAACGGCGAGTGAAGCGGGAAGAGCCCAGCG 15475 Query 61 CCGAATCCCC---GCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||| || | | || | |||||| ||||||||| Sbjct 15476 CCGAATCCCCTCGTCCTTGTAGCGGCGGGCGGGAACTGTGGCGTA 15520 >seq23630 Length=932 Score = 116 bits (128), Expect = 2e-24 Identities = 89/105 (85%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 826 GGAAAAGAAACTAACCAGGATTCCCCCAGTAACGGCGAGTGAAGCGGGAAGAGCCCAGCG 767 Query 61 CCGAATCCCC---GCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||| || | | || | |||||| ||||||||| Sbjct 766 CCGAATCCCCTCGTCCTTGTAGCGGCGGGCGGGAACTGTGGCGTA 722 >seq28263 Length=100138 Score = 104 bits (114), Expect = 1e-20 Identities = 65/70 (93%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||| || ||||||||||||||||| | ||||||||||||| Sbjct 44490 GGAAAAGAAACTAACCAGGATTTCCCCAGTAACGGCGAGTGAAGCGTGAAGAGCCCAGCG 44549 Query 61 CCGAATCCCC 70 |||||||||| Sbjct 44550 CCGAATCCCC 44559 >seq33800 Length=37378 Score = 84.2 bits (92), Expect = 1e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| || |||||||| Sbjct 36804 GGAAAAGAAACTAACTAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAAAAGCCCAGCA 36745 Query 61 CCGAATCCC 69 | ||||||| Sbjct 36744 CTGAATCCC 36736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230283100800