Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq45717 241 2e-61 seq26258 226 5e-57 seq35711 205 1e-50 seq33582 203 5e-50 seq3012 201 2e-49 seq16889 158 2e-36 seq3527 145 1e-32 seq21783 131 3e-28 seq31698 114 2e-23 >seq45717 Length=6850 Score = 241 bits (266), Expect = 2e-61 Identities = 211/258 (82%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 1094 CCTTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 1035 Query 73 CTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC-CATA 131 |||| || | ||||| | ||| | |||||||||||||| | | | || || | | Sbjct 1034 -TCAATCT-CGGGCGGCTGAACGCCGCTTGTCCCTCTAAGAAGTCGGTCGCCGACACGTT 977 Query 132 GTCGATGG---GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | | | | |||||||||| | | |||||||||||||||||||| |||| |||| Sbjct 976 AAGGGTCGCACGACTATTTAGCAAGCCAGAGTCTCGTTCGTTATCGGAATCAACCTGACA 917 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 916 AATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGAAATCAAGAAAGAGCTC 857 Query 249 TCAATCTGTCCTCCCTCG 266 |||||||||| ||||| Sbjct 856 TCAATCTGTCAATCCTCG 839 >seq26258 Length=18207 Score = 226 bits (250), Expect = 5e-57 Identities = 210/259 (81%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 13965 CCTTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG- 13907 Query 73 CTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC-CATA 131 ||||| | || ||||| | ||| | |||||||||||||| | | | || || | | Sbjct 13906 CTCAATC-TCGGGCGGCTGAACGCCGCTTGTCCCTCTAAGAAGTCGGTCGCCGACACGTT 13848 Query 132 GTCGATGG---GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | | | | |||||||||| | | |||||||||||||||||||| |||| |||| Sbjct 13847 AAGGGTCGCACGACTATTTAGCAAGCCAGAGTCTCGTTCGTTATCGGAATCAACCTGACA 13788 Query 189 AATCACTCCACCAACTAAGAAC-GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct 13787 AATCGCTCCACCAACTAAGAACGGGCCATGCACCACCACCCACGAAATCAAGAAAGAGCT 13728 Query 248 ATCAATCTGTCCTCCCTCG 266 || ||||||| ||||| Sbjct 13727 CTC-ATCTGTCAATCCTCG 13710 >seq35711 Length=1949945 Score = 205 bits (226), Expect = 1e-50 Identities = 203/258 (79%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || |||||||||| ||| | |||||| | ||||||||||||||||| ||||||||||||| Sbjct 1327369 CCTTCAGTGTAGCACGCATTCGGCCCCGGACATCTAAGGGCATCACTGACCTGTTATTGC 1327428 Query 73 CTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC-CATA 131 |||| || | | ||| | |||| | |||||||||||||| | | | | || | | Sbjct 1327429 -TCAATCT-CGGGCGTCTGAACGCCACTTGTCCCTCTAAGAAGTCGGTCGCTGACACGTT 1327486 Query 132 GTCGATGGGGCTA---TTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | | | ||| ||||||| | | |||| ||||||||||||||| |||| |||| Sbjct 1327487 AAGGGTAGCACTACTATTTAGCAAGCCAGAGTCTTGTTCGTTATCGGAATGAACCTGACA 1327546 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 1327547 AATCACTCCACTAACTAAGAACGGCCATGCACCACCATCCACGAAATCAAGAAAGAGCTC 1327606 Query 249 TCAATCTGTCCTCCCTCG 266 |||||||||| ||||| Sbjct 1327607 TCAATCTGTCAATCCTCG 1327624 >seq33582 Length=955 Score = 203 bits (224), Expect = 5e-50 Identities = 194/254 (76%), Gaps = 31/254 (12%) Strand=Plus/Plus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 414 CCTTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 473 Query 73 CTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG 132 |||| || | ||||| | ||| | |||||||||||||| | | | || || | Sbjct 474 -TCAATCT-CGGGCGGCTGAACGCCGCTTGTCCCTCTAAGAAGTCGGTCGCCGACAA--- 528 Query 133 TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192 |||||||||||||||||||| |||| |||||||| Sbjct 529 --------------------------GTCTCGTTCGTTATCGGAATCAACCTGACAAATC 562 Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 563 GCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGAAATCAAGAAAGAGCTCTCAA 622 Query 253 TCTGTCCTCCCTCG 266 |||||| ||||| Sbjct 623 TCTGTCAATCCTCG 636 >seq3012 Length=9095 Score = 201 bits (222), Expect = 2e-49 Identities = 180/221 (81%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 42 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATA 101 ||||||||||||||||||||||||||||||| |||| || | |||||| | ||| | Sbjct 1337 ACATCTAAGGGCATCACAGACCTGTTATTGC-TCAATCT-CGGGTGGCTGAACGCCGCTT 1394 Query 102 GTCCCTCTAAGAAGCCAGCCACCAAC-CATAGTCGATGG---GGCTATTTAGCAGGTTAA 157 |||||||||||||| | | ||| || | | | | | | |||||||||| | | Sbjct 1395 GTCCCTCTAAGAAGTCGGTCACTGACACGTTAAGGGTCGCACGACTATTTAGCAAGCCAG 1454 Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 ||||| |||||||||||||| |||| | |||||| |||||||||||||||||||||||| Sbjct 1455 AGTCTCATTCGTTATCGGAATCAACCTGTCAAATCGCTCCACCAACTAAGAACGGCCATG 1514 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| | ||||||||||||||| |||||||||| Sbjct 1515 CACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 1555 >seq16889 Length=2476 Score = 158 bits (174), Expect = 2e-36 Identities = 110/125 (88%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||| | | |||||||||||||||||||| |||| |||||||| |||||||| Sbjct 2428 CTATTTAGCAAGCCAGAGTCTCGTTCGTTATCGGAATCAACCTGACAAATCGCTCCACCA 2369 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTC 261 |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 2368 ACTAAGAACGGCCATGCACCACCACCCACGAAATCAAGAAAGAGCTCTCAATCTGTCAAT 2309 Query 262 CCTCG 266 ||||| Sbjct 2308 CCTCG 2304 >seq3527 Length=23894 Score = 145 bits (160), Expect = 1e-32 Identities = 167/218 (77%), Gaps = 9/218 (4%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||| | ||| |||| || ||||||||||||||||||||||| |||||| Sbjct 4243 CCTTCAGTGTAGCGTGTGTGTGGCCTGGA-CATCTAAGGGCATCACAGACCTGCTATTGC 4185 Query 73 CTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA--T 130 |||| ||| | ||||| | ||| | |||||||||||||| | | | || || | Sbjct 4184 -TCAATCTTGGGT-GGCTGAATGCCGCTTGTCCCTCTAAGAAGACGGTCGCCGACACGTT 4127 Query 131 A---GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | ||| | |||||||||| | || ||| ||| ||||| ||||| |||| ||| Sbjct 4126 AAGGGTC-ACACAACTATTTAGCAAGCCAAAATCTTGTTTGTTATTGGAATCAACCTGAC 4068 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225 |||| |||||||||||||||||| |||||||||| || Sbjct 4067 AAATTGCTCCACCAACTAAGAACGACCATGCACCAACA 4030 >seq21783 Length=1923826 Score = 131 bits (144), Expect = 3e-28 Identities = 86/95 (91%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 162 TCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 221 || |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 886510 TCATTCGTTATCGGAATCAACATGACAAATCACTCCACCAACTAAGAACGGCCATGCACA 886451 Query 222 ACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 |||||||| ||||||||||||||| |||||||| Sbjct 886450 ACCACCCACGAAATCAAGAAAGAGCTCTCAATCTG 886416 >seq31698 Length=1061 Score = 114 bits (126), Expect = 2e-23 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1061 ACCTGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGAAATCAAGA 1002 Query 241 AAGAGCTATCAATCTGTCCTCCCTCG 266 ||||||| |||||||||| ||||| Sbjct 1001 AAGAGCTCTCAATCTGTCAATCCTCG 976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796382247720