Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq45717 87.8 1e-15 seq33582 87.8 1e-15 seq26258 87.8 1e-15 seq5 87.8 1e-15 seq3527 78.8 6e-13 seq28263 73.4 2e-11 >seq45717 Length=6850 Score = 87.8 bits (96), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| || || || ||||||||| ||||||||||| |||||||||| Sbjct 1301 TCCGAA-GATCTCACTAAACCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1245 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 1244 GGCAGGGACGTAAT 1231 >seq33582 Length=955 Score = 87.8 bits (96), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| || || || ||||||||| ||||||||||| |||||||||| Sbjct 207 TCCGAA-GATCTCACTAAACCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 263 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 264 GGCAGGGACGTAAT 277 >seq26258 Length=18207 Score = 87.8 bits (96), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| || || || ||||||||| ||||||||||| |||||||||| Sbjct 14172 TCCGAA-GATCTCACTAAACCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 14116 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 14115 GGCAGGGACGTAAT 14102 >seq5 Length=606682 Score = 87.8 bits (96), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| || || || ||||||||| ||||||||||| |||||||||| Sbjct 445272 TCCGAA-GATCTCACTAAACCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 445216 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 445215 GGCAGGGACGTAAT 445202 >seq3527 Length=23894 Score = 78.8 bits (86), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 3/82 (4%) Strand=Plus/Minus Query 43 AAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCA 102 |||| ||||||||||| || ||| | ||||| ||||||||||| ||||| |||||||| Sbjct 4440 AAAGACCTCACTAAGCCGTTCAATTTG-TAGTA-GCGACGGGCGGTGTGTAAAAAGGGCA 4383 Query 103 GGGACGTAATACAACGCAAGCT 124 |||||||||| | || |||||| Sbjct 4382 GGGACGTAAT-CGACACAAGCT 4362 >seq28263 Length=100138 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| || || || ||| ||||| | |||||| || |||||||||| Sbjct 43293 TCCGAA-GATCTCACTAAACCGTT-CAATCGTTAGTA-GTGACGGGTGGTGTGTACAAAG 43237 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 43236 GGCAGGGACGTAAT 43223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300647381600