Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq3416 86.0 7e-15 seq45717 82.4 9e-14 seq26258 82.4 9e-14 seq16889 82.4 9e-14 seq8576 82.4 9e-14 >seq3416 Length=585 Score = 86.0 bits (94), Expect = 7e-15 Identities = 104/135 (77%), Gaps = 10/135 (7%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 342 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 400 Query 69 GTA-----AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123 | | |||||||||| | ||||||||||| |||| ||||| || | || || || Sbjct 401 GAAGTTTTAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGTGCCGG-CCCACCT 459 Query 124 C-ACAC-CAATGAAG 136 | |||| |||||||| Sbjct 460 CGACACTCAATGAAG 474 >seq45717 Length=6850 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTA 71 |||||| ||| ||||| | ||||||||| ||||||||||||| ||| | ||||| Sbjct 452 ACCAACGCAAT-GGGACCGAGGTCCTATTCCATTATTCCATGCTGGACTATCCAGGCGTG 394 Query 72 A--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||||||||||||||||||||| |||| ||||| || Sbjct 393 GCGGCCTGCTTTGAACACTCTAATTTCTTCAAAGTAAACGT 353 >seq26258 Length=18207 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTA 71 |||||| ||| ||||| | ||||||||| ||||||||||||| ||| | ||||| Sbjct 13323 ACCAACGCAAT-GGGACCGAGGTCCTATTCCATTATTCCATGCTGGACTATCCAGGCGTG 13265 Query 72 A--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||||||||||||||||||||| |||| ||||| || Sbjct 13264 GCGGCCTGCTTTGAACACTCTAATTTCTTCAAAGTAAACGT 13224 >seq16889 Length=2476 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTA 71 |||||| ||| ||||| | ||||||||| ||||||||||||| ||| | ||||| Sbjct 1917 ACCAACGCAAT-GGGACCGAGGTCCTATTCCATTATTCCATGCTGGACTATCCAGGCGTG 1859 Query 72 A--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||||||||||||||||||||| |||| ||||| || Sbjct 1858 GCGGCCTGCTTTGAACACTCTAATTTCTTCAAAGTAAACGT 1818 >seq8576 Length=1413 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTA 71 |||||| ||| ||||| | ||||||||| ||||||||||||| ||| | ||||| Sbjct 1273 ACCAACGCAAT-GGGACCGAGGTCCTATTCCATTATTCCATGCTGGACTATCCAGGCGTG 1215 Query 72 A--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||||||||||||||||||||| |||| ||||| || Sbjct 1214 GCGGCCTGCTTTGAACACTCTAATTTCTTCAAAGTAAACGT 1174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594887944080