Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq45717 205 2e-50 seq26258 205 2e-50 seq33582 201 2e-49 seq3527 132 9e-29 seq28263 118 2e-24 seq5 89.7 1e-15 seq35711 87.8 3e-15 >seq45717 Length=6850 Score = 205 bits (226), Expect = 2e-50 Identities = 239/316 (76%), Gaps = 9/316 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCG----CCGGCTTC 75 || |||||| | | |||||||||| | || | || || |||| ||| |||| Sbjct 938 GAACGAGACTCTGGCTTGCTAAATAGTCGTGCGACCCTTAACGTGTCGGCGACCGACTTC 997 Query 76 TTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 |||||||||| | |||| | ||||| || | ||||| |||||||||||||||||||| Sbjct 998 TTAGAGGGACAAGCGGCGTTCAGCCGCCCGA-GATTGAG-CAATAACAGGTCTGTGATGC 1055 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCT 193 |||||||||| | ||||||||||||||||||||||| | || || || || | || Sbjct 1056 CCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGGATCAGCGGGTGTCGCCTCCC 1115 Query 194 TGGCCGGAAGGTCTG-GGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 |||||| ||| | || |||| | | | | ||||||| ||||||| | |||| | Sbjct 1116 TGGCCGACAGGACCCAGGCAATCCGATGAGCCCCCTTCGTGCTAGGGATAGGGAATTGTA 1175 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 |||||| | ||| |||||||||| || |||| ||||| ||||| ||| || || |||||| Sbjct 1176 ATTATTTCCCTTGAACGAGGAATTCCCAGTAGGCGCGAGTCATAAGCTCGTGTCGATTAC 1235 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 1236 GTCCCTGCCCTTTGTA 1251 >seq26258 Length=18207 Score = 205 bits (226), Expect = 2e-50 Identities = 239/316 (76%), Gaps = 9/316 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCG----CCGGCTTC 75 || |||||| | | |||||||||| | || | || || |||| ||| |||| Sbjct 13809 GAACGAGACTCTGGCTTGCTAAATAGTCGTGCGACCCTTAACGTGTCGGCGACCGACTTC 13868 Query 76 TTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 |||||||||| | |||| | ||||| || | ||||| |||||||||||||||||||| Sbjct 13869 TTAGAGGGACAAGCGGCGTTCAGCCGCCCGA-GATTGAG-CAATAACAGGTCTGTGATGC 13926 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCT 193 |||||||||| | ||||||||||||||||||||||| | || || || || | || Sbjct 13927 CCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGGATCAGCGGGTGTCGCCTCCC 13986 Query 194 TGGCCGGAAGGTCTG-GGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 |||||| ||| | || |||| | | | | ||||||| ||||||| | |||| | Sbjct 13987 TGGCCGACAGGACCCAGGCAATCCGATGAGCCCCCTTCGTGCTAGGGATAGGGAATTGTA 14046 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 |||||| | ||| |||||||||| || |||| ||||| ||||| ||| || || |||||| Sbjct 14047 ATTATTTCCCTTGAACGAGGAATTCCCAGTAGGCGCGAGTCATAAGCTCGTGTCGATTAC 14106 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 14107 GTCCCTGCCCTTTGTA 14122 >seq33582 Length=955 Score = 201 bits (222), Expect = 2e-49 Identities = 207/264 (78%), Gaps = 5/264 (2%) Strand=Plus/Minus Query 68 CCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 ||| |||||||||||||| | |||| | ||||| || | ||||| |||||||||||| Sbjct 518 CCGACTTCTTAGAGGGACAAGCGGCGTTCAGCCGCCCGA-GATTGAG-CAATAACAGGTC 461 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-T 185 |||||||||||||||||| | ||||||||||||||||||||||| | || || || | Sbjct 460 TGTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGGATCAGCGGGTGT 401 Query 186 CATCACCTTGGCCGGAAGGTCTG-GGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 | | || |||||| ||| | || |||| | | | | ||||||| ||||||| Sbjct 400 CGCCTCCCTGGCCGACAGGACCCAGGCAATCCGATGAGCCCCCTTCGTGCTAGGGATAGG 341 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| ||||||| | ||| |||||||||| || |||| ||||| ||||| ||| || | Sbjct 340 GAATTGTAATTATTTCCCTTGAACGAGGAATTCCCAGTAGGCGCGAGTCATAAGCTCGTG 281 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 | |||||||||||||||||||||| Sbjct 280 TCGATTACGTCCCTGCCCTTTGTA 257 >seq3527 Length=23894 Score = 132 bits (146), Expect = 9e-29 Identities = 193/263 (73%), Gaps = 11/263 (4%) Strand=Plus/Plus Query 68 CCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 ||| |||||||||||||| | |||| | |||| | ||| ||||| ||||| |||||| Sbjct 4140 CCGTCTTCTTAGAGGGACAAGCGGCATTCAGCC-ACCCAAGATTGAG-CAATAGCAGGTC 4197 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 ||||||||||||||||| || |||| ||| | ||||||||||| || | | || | Sbjct 4198 TGTGATGCCCTTAGATG-TCCAGGCCACACACACGCTACACTGA-AGGG---ATCAGATG 4252 Query 187 ATCACCTTGGCCGGAAGG-TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 | | |||||| ||| | ||||||| | | | | | ||||| ||||||| Sbjct 4253 GT--TCCTGGCCGATAGGACCCAGGTAATCCGATGAGCCCCATTTGTGCTAGGGATAGGA 4310 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||| ||| ||| ||||| ||| |||||| | |||| || || ||||| ||| | || Sbjct 4311 AATTGTAATCATTTCTCTTGAACAAGGAATTCACAGTAGGCACGAGTCATAAGCTTGTGT 4370 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| || Sbjct 4371 CGATTACGTCCCTGCCCTTTTTA 4393 >seq28263 Length=100138 Score = 118 bits (130), Expect = 2e-24 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 142 TGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGGCCGG 200 ||| | ||||||||||| ||||||||||| | || || || || | || |||||| Sbjct 43055 TGTCCGGGGCCGCACGCACGCTACACTGAAGGGATCAGCGGGTGTCGCCTCCCTGGCCGA 43114 Query 201 AAGGTCTG-GGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||| | || |||| | | | | |||||| ||||||| | |||| ||||||| Sbjct 43115 CAGGACCCAGGCAATCCGATGAGCCCCCTACGTGCTAGGGATAGGGAATTGTAATTATTT 43174 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 | ||| |||||||||| || |||| ||||| ||||| || || || ||||||||||||| Sbjct 43175 CCCTTGAACGAGGAATTCCCAGTAGGCGCGAGTCATATGCTCGTGTCGATTACGTCCCTG 43234 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 43235 CCCTTTGTA 43243 >seq5 Length=606682 Score = 89.7 bits (98), Expect = 1e-15 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| | ||| |||||||||| || |||| ||||| ||||| ||| || || ||||| Sbjct 445146 AATTATTTCCCTTGAACGAGGAATTCCCAGTAGGCGCGAGTCATAAGCTCGTGTCGATTA 445205 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 445206 CGTCCCTGCCCTTTGTA 445222 >seq35711 Length=1949945 Score = 87.8 bits (96), Expect = 3e-15 Identities = 138/191 (72%), Gaps = 5/191 (3%) Strand=Plus/Minus Query 68 CCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 ||| |||||||||||||| | ||| | || || || | ||||| |||||||||||| Sbjct 1327473 CCGACTTCTTAGAGGGACAAGTGGCGTTCAGACGCCCGA-GATTGAG-CAATAACAGGTC 1327416 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-T 185 ||||||||||||||||| | |||||| | ||| |||||||||| | || | || | Sbjct 1327415 AGTGATGCCCTTAGATGTCCGGGGCCGAATGCGTGCTACACTGAAGGGATCAGTGGGTGT 1327356 Query 186 CATCACCTTGGCCGGAAG-GTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || | || |||| | || | || |||||| | | | | | ||||| ||||||| Sbjct 1327355 CACCTCCCTGGCTGACAGAACCCAGGCAATCTTATGAGCCCCCTTTGTGCTAGGGATAGG 1327296 Query 245 GCATTGCAATT 255 | |||| |||| Sbjct 1327295 GAATTGTAATT 1327285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946687375360