Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq45717 551 2e-154 seq18504 356 8e-96 seq7373 159 1e-36 seq30738 105 2e-20 seq42756 89.7 2e-15 seq7580 89.7 2e-15 seq44669 78.8 3e-12 >seq45717 Length=6850 Score = 551 bits (610), Expect = 2e-154 Identities = 454/552 (82%), Gaps = 26/552 (5%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || | | |||| || | | |||| | |||| |||||||||||||| Sbjct 5848 CTTTTGCTCCACGAGGGGTTTCCGTCCCCGCTGAGCTCGCCTTGGGACACCTGCGTTACC 5789 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||| |||| | ||| || Sbjct 5788 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACGCTGTCGCCGGAGCGGGTC 5729 Query 127 GG----CCCGCGAA----------GGACC---TTAACGCCAGAAAATGGT-CGGTGAAGA 168 | |||| ||| || || | ||||| ||||| || || || | Sbjct 5728 GCGGGCCCCGAGAACTTGCCTCGGGGCCCGCTTCAACGCTAGAAACCGGGACGCCGAGGC 5669 Query 169 CCAGTTCC--GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC 226 || | ||| |||||| | ||||| ||| |||||| | ||||||||||||||| || Sbjct 5668 CCCGCTCCCCGCTTCACCGGATAAGTGAAAGAACGATCGGAGTAGTGGTATTTCACCGGC 5609 Query 227 GCCGAAACGG------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGA 280 | || ||| ||||||| ||| |||| || | | ||| |||||| ||||||| Sbjct 5608 GACGCCACGAGGACGCCTCCCACCTATCCTACGCCCCCAATGTCCCTTCACAGAGTCGGA 5549 Query 281 CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTG 340 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct 5548 CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTCTGCCAAGCCCGTTCCCTTG 5489 Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5488 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 5429 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5428 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 5369 Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5368 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 5309 Query 521 CATTGCGTCAAC 532 ||| |||||||| Sbjct 5308 CATCGCGTCAAC 5297 >seq18504 Length=1502 Score = 356 bits (394), Expect = 8e-96 Identities = 346/444 (78%), Gaps = 26/444 (6%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || | | |||| || | | |||| | |||| |||||||||||||| Sbjct 1277 CTTTTGCTCCACGAGGGGTTTCCGTCCCCGCTGAGCTCGCCTTGGGACACCTGCGTTACC 1218 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||| |||| | ||| || Sbjct 1217 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACGCTGTCGCCGGAGCGGGTC 1158 Query 127 GG----CCCGCGAA----------GGACC---TTAACGCCAGAAAATGGT-CGGTGAAGA 168 | |||| ||| || || | ||||| ||||| || || || | Sbjct 1157 GCGGGCCCCGAGAACTTGCCTCGGGGCCCGCTTCAACGCTAGAAACCGGGACGCCGAGGC 1098 Query 169 CCAGTTCC--GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC 226 || | ||| |||||| | ||||| ||| |||||| | ||||||||||||||| || Sbjct 1097 CCCGCTCCCCGCTTCACCGGATAAGTGAAAGAACGATCGGAGTAGTGGTATTTCACCGGC 1038 Query 227 GCCGAAACGG------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGA 280 | || ||| ||||||| ||| |||| || | | ||| |||||| ||||||| Sbjct 1037 GACGCCACGAGGACGCCTCCCACCTATCCTACGCCCCCAATGTCCCTTCACAGAGTCGGA 978 Query 281 CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTG 340 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct 977 CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTCTGCCAAGCCCGTTCCCTTG 918 Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 917 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 858 Query 401 CGTCACTAATTAGATGACGAGGCA 424 ||||||||||||||||| |||||| Sbjct 857 CGTCACTAATTAGATGATGAGGCA 834 >seq7373 Length=338722 Score = 159 bits (176), Expect = 1e-36 Identities = 96/101 (95%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGG 347 ||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| Sbjct 74124 CAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTCTGCCAAGCCCGTTCGCTTGGCTGTGG 74065 Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 |||||||||||| ||||||||||||||||||||||||| || Sbjct 74064 TTTCGCTAGATAATAGATAGGGACAGTGGGAATCTCGTCAA 74024 >seq30738 Length=282992 Score = 105 bits (116), Expect = 2e-20 Identities = 68/73 (93%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 |||||||||||||||||||||||||||| ||| ||||| ||| |||||||||||||||| Sbjct 146404 AAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTGGCCAAACCC-TTCCCTTGGCTGTGGT 146346 Query 349 TTCGCTAGATAGT 361 ||||||||||||| Sbjct 146345 TTCGCTAGATAGT 146333 >seq42756 Length=3937 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || | | |||| || | | |||| | |||| |||||||||||||| Sbjct 558 CTTTTGCTCCACGAGGGGTTTCCGTCCCCGCTGAGCTCGCCTTGGGACACCTGCGTTACC 499 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||||||| ||||||||| |||||||||| |||||| |||| Sbjct 498 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACGCTGTC 452 >seq7580 Length=433 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || | | |||| || | | |||| | |||| |||||||||||||| Sbjct 244 CTTTTGCTCCACGAGGGGTTTCCGTCCCCGCTGAGCTCGCCTTGGGACACCTGCGTTACC 303 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||||||| ||||||||| |||||||||| |||||| |||| Sbjct 304 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACGCTGTC 350 >seq44669 Length=345899 Score = 78.8 bits (86), Expect = 3e-12 Identities = 43/43 (100%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 345093 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 345135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634315029760