Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq16889 441 2e-121 seq8576 340 5e-91 seq26258 309 9e-82 seq27258 214 5e-53 seq11827 187 8e-45 seq45717 145 2e-32 >seq16889 Length=2476 Score = 441 bits (488), Expect = 2e-121 Identities = 428/543 (79%), Gaps = 43/543 (8%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || |||||||| ||||| | || | |||||| || ||||| ||||| | ||||||||| Sbjct 1586 GTGCTCATTCCGATTACGGGGCCTCCAAAGAGTCCCGTATCGTTATTTTTCGTCACTACC 1527 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1526 TCCCCGTGTCGGGAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 1467 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| Sbjct 1466 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCCACCACGGT 1407 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || | |||| |||||||||||||||||||| | | ||| || | |||||||| Sbjct 1406 AGGCGCATAACGTACCGTCGAAAGTTGATAGGGCAGACACTCGAAAGATTCGTCGCCGGC 1347 Query 240 TCA-AGGCCATGCGATTCGTTAAGTTATTATGA-ATCACCA--AGGA----GCCC----- 286 || ||||| |||||| || ||||||| || || ||| |||| |||| Sbjct 1346 GCAGAGGCCGTGCGATCCGCCAAGTTATCCAGAGTTCGCCAGGAGGACCGGGCCCACCAC 1287 Query 287 ---CGAAGG------------GCGTTGGTTTTTTATCTAATAAATACACCCCTTC--CGA 329 |||||| | || ||| || |||||||| ||| | | | ||| Sbjct 1286 CCGCGAAGGAGGCAGGACACCGGGTCGGTCTTGGTCCTAATAAAAGCACGCATCCCGCGA 1227 Query 330 AGT---CGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA 386 || || | | ||||||||||||||||||||| |||| |||||||| ||||| Sbjct 1226 GGTCAGCGCCGAGGTAGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCA---AGTAA 1170 Query 387 GG---TACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCAC--TGTA 441 || || |||||| ||| ||||||||||||||||||||||||||||||||| |||| Sbjct 1169 GGGGTAACGATCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACCGTGTA 1110 Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501 || ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1109 CCGA-GGCTCGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 1051 Query 502 CAG 504 ||| Sbjct 1050 CAG 1048 >seq8576 Length=1413 Score = 340 bits (376), Expect = 5e-91 Identities = 349/450 (78%), Gaps = 42/450 (9%) Strand=Plus/Minus Query 93 GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAA 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 925 GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGA 866 Query 153 TTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGG 212 ||||||||||||||||| |||| ||||||| || | |||| |||||||||||||||| Sbjct 865 TTCCCCGTTACCCGTTGCCACCACGGTAGGCGCATAACGTACCGTCGAAAGTTGATAGGG 806 Query 213 CAGAAATTTGAATGAACCATCGCCGGCTCA-AGGCCATGCGATTCGTTAAGTTATTATGA 271 |||| | | ||| || | |||||||| || ||||| |||||| || ||||||| || Sbjct 805 CAGACACTCGAAAGATTCGTCGCCGGCGCAGAGGCCGTGCGATCCGCCAAGTTATCCAGA 746 Query 272 -ATCACCA--AGGA----GCCC--------CGAAGG------------GCGTTGGTTTTT 304 || ||| |||| |||| |||||| | || ||| || Sbjct 745 GTTCGCCAGGAGGACCGGGCCCACCACCCGCGAAGGAGGCAGGACACCGGGTCGGTCTTG 686 Query 305 TATCTAATAAATACACCCCTTC--CGAAGT---CGGGGTTTTTAGCATGTATTAGCTCTA 359 |||||||| ||| | | | ||| || || | | |||||||||||||||| Sbjct 685 GTCCTAATAAAAGCACGCATCCCGCGAGGTCAGCGCCGAGGTAGGCATGTATTAGCTCTA 626 Query 360 GAATTACCACGGTTATCCATGTAGTAAGG---TACTATCAAATAAACGATAACTGATTTA 416 ||||| |||| |||||||| ||||||| || |||||| ||| |||||||||||| Sbjct 625 GAATTGCCACAGTTATCCA---AGTAAGGGGTAACGATCAAAGGAACCATAACTGATTTA 569 Query 417 ATGAGCCATTCGCAGTTTCAC--TGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474 ||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 568 ATGAGCCATTCGCAGTTTCACCGTGTACCGA-GGCTCGTACTTAGACATGCATGGCTTAA 510 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 509 TCTTTGAGACAAGCATATGACTACTGGCAG 480 >seq26258 Length=18207 Score = 309 bits (342), Expect = 9e-82 Identities = 231/268 (86%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || |||||||| ||||| | || | |||||| || ||||| ||||| | ||||||||| Sbjct 12992 GTGCTCATTCCGATTACGGGGCCTCCAAAGAGTCCCGTATCGTTATTTTTCGTCACTACC 12933 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12932 TCCCCGTGTCGGGAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 12873 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| Sbjct 12872 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCCACCACGGT 12813 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || | |||| |||||||||||||||||||| | | ||| || | |||||||| Sbjct 12812 AGGCGCATAACGTACCGTCGAAAGTTGATAGGGCAGACACTCGAAAGATTCGTCGCCGGC 12753 Query 240 TCA-AGGCCATGCGATTCGTTAAGTTAT 266 || ||||| |||||| || ||||||| Sbjct 12752 GCAGAGGCCGTGCGATCCGCCAAGTTAT 12725 >seq27258 Length=301074 Score = 214 bits (236), Expect = 5e-53 Identities = 355/508 (70%), Gaps = 55/508 (11%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||| ||| | || | ||| |||||||| ||||| | | || |||| Sbjct 11534 GTGCTCATTCCGATTTCGGCCTCCCAGAGAATTCTGTATCATTATTTTTGGAGACCACCT 11593 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || ||||||||| | | ||||| |||||||||||||||||||||||||||||||||||| Sbjct 11594 CCGCGTGTCGGGTATCG-TAATTCGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 11652 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||| ||||||||||||||||||| || || ||| ||||||||||||| |||| |||| Sbjct 11653 TCTCCGGCTCCCTCTCCGGAATCG-ACTCTGATT-CCCGTTACCCGTTTCCACCACGGTA 11710 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGG------GCAGAAATTTGAATGAACCATCG 234 ||| | | | || || |||| ||| | ||| ||| ||| || | ||| Sbjct 11711 GGCGCAGAACGTGCCCTC----GTTGCCAGGGTATACGTAGACATTCGAAAGATTCGTCG 11766 Query 235 CCGGCTCA-AGGCCATGCGATTCGTTAAGTTATTATGA----ATCA-----------CCA 278 ||||| || ||| | ||||| || ||||||| | || ||| || Sbjct 11767 CCGGCGCAGAGGTCGTGCGACCCGCCAAGTTATCAAGAGTTTGTCAGGAGAACCGGGCCC 11826 Query 279 AGGAGCCCCGAAG-GGCG----------TTGGTTTTTTATCTAATAAATACACCCCTTCC 327 | | || ||| | |||| | ||| || | ||||||||| || | Sbjct 11827 ACCACCCGCGATGCGGCGGAACACCGAATCGGTGTTGT-TCTAATAAAAGCA-------C 11878 Query 328 GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAG 387 || ||| | | || ||| |||||||||||||||||| ||| |||| ||| || Sbjct 11879 GAGGTCAG------CATCACGTAATAGCTCTAGAATTACCACAGTTTTCCAAGTAAGGAG 11932 Query 388 GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT- 446 || ||||||| || ||| || |||||||||||||||||||||||||| ||| | | Sbjct 11933 TAACAATCAAATGAATAATAGCTTATTTAATGAGCCATTCGCAGTTTCACCGTACACCTA 11992 Query 447 TGCTTATACTTAGACATGCATGGCTTAA 474 |||| | ||| |||||| ||||||||| Sbjct 11993 GGCTTGTTCTTGGACATGTATGGCTTAA 12020 >seq11827 Length=4993 Score = 187 bits (206), Expect = 8e-45 Identities = 140/161 (87%), Gaps = 9/161 (6%) Strand=Plus/Minus Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT---ACTATCAAATAAACGA 405 |||||||||||||||| |||| |||||||| ||||||| || |||||| ||| | Sbjct 4993 TATTAGCTCTAGAATTGCCACAGTTATCCA---AGTAAGGGGTAACGATCAAAGGAACCA 4937 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCAC--TGTATAGATTGCTTATACTTAGACAT 463 |||||||||||||||||||||||||||||||| |||| || ||| ||||||||||| Sbjct 4936 TAACTGATTTAATGAGCCATTCGCAGTTTCACCGTGTACCGA-GGCTCGTACTTAGACAT 4878 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||| Sbjct 4877 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 4837 >seq45717 Length=6850 Score = 145 bits (160), Expect = 2e-32 Identities = 106/122 (87%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||| ||||| | || ||||| || ||||| ||||| | |||||||||| Sbjct 121 GTGCTCATTCCGATTACGGGGCCTCCAAGAGTCCCGTATCGTTATTTTTCGTCACTACCT 62 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 61 CCCCGTGTCGGGAATGGGTAATTTGCGCGCCTGCTGCCTTCCTT-GATGTGGTAGCCGTT 3 Query 121 TC 122 || Sbjct 2 TC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509582571520