Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq267010 264 2e-68 seq174873 201 2e-49 seq8297 201 2e-49 >seq267010 Length=354 Score = 264 bits (292), Expect = 2e-68 Identities = 193/219 (88%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 ||||||||||||||||||| |||||||||||| |||||||||| |||||||||||| || Sbjct 354 TACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCATTTACTAGGAATT-CC 297 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATTA 120 ||||| | || ||| ||||||||||||| |||||||||||| | | ||||||| ||||| Sbjct 296 TCGTTCATGATCAATAATTGCAATGATCAATCCCCATCACGTCGGACTTTCAAAAGATTA 237 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| |||| |||| ||||| | ||||||| ||||| | ||||||||||||||||||| Sbjct 236 CCCAAACCTTTCGGTTAAGGTTA-AGACTCGCTGAATCCGACAGTGTAGCGCGCGTGCGG 178 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 ||||||||||||||||||||||||||||||||||||||| Sbjct 177 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 139 >seq174873 Length=553 Score = 201 bits (222), Expect = 2e-49 Identities = 186/228 (82%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 12 AGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGA 71 ||||||||| |||||||||||| |||||||||||||||| |||||| ||||||| ||| Sbjct 553 AGGGACGTAATCAACGCGAGCTA-ATGACTCGCGCTTACTGGGAATT-CCTCGTTCAAGG 496 Query 72 CCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATTACCCGGACCTG 130 |||||||||||| ||||||| | ||||| ||||| | ||||||||| ||| Sbjct 495 GAAACAATTGCAATTCCCTATCCCTAGCACGACCGGGGTTCAAGGGATTACCCGGGCCTT 436 Query 131 TCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 |||||||||| || || || ||| ||||||||||||||||||||||| |||||| Sbjct 435 TCGGCCAAGG-GAAGCACACGATGATCCGGTCAGTGTAGCGCGCGTGCGGCCCCGAACAT 377 Query 191 CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 |||||||||||||||||||||||||| ||||| || |||| ||||| Sbjct 376 CTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGG-CTAAA 331 >seq8297 Length=10145 Score = 201 bits (222), Expect = 2e-49 Identities = 186/228 (82%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 12 AGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGA 71 ||||||||| |||||||||||| |||||||||||||||| |||||| ||||||| ||| Sbjct 8929 AGGGACGTAATCAACGCGAGCTA-ATGACTCGCGCTTACTGGGAATT-CCTCGTTCAAGG 8872 Query 72 CCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATTACCCGGACCTG 130 |||||||||||| ||||||| | ||||| ||||| | ||||||||| ||| Sbjct 8871 GAAACAATTGCAATTCCCTATCCCTAGCACGACCGGGGTTCAAGGGATTACCCGGGCCTT 8812 Query 131 TCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 |||||||||| || || || ||| ||||||||||||||||||||||| |||||| Sbjct 8811 TCGGCCAAGG-GAAGCACACGATGATCCGGTCAGTGTAGCGCGCGTGCGGCCCCGAACAT 8753 Query 191 CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 |||||||||||||||||||||||||| ||||| || |||| ||||| Sbjct 8752 CTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGG-CTAAA 8707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 748515722915