Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq8649 82.4 4e-14 seq35109 78.8 4e-13 seq400009 75.2 5e-12 >seq8649 Length=761 Score = 82.4 bits (90), Expect = 4e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||||||||||||| |||| ||||||||| Sbjct 488 GGAAAAGAAACTAACGAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGACAAGCCCAGCG 429 Query 61 CCGAATCC 68 | ||||| Sbjct 428 CTAAATCC 421 >seq35109 Length=1823 Score = 78.8 bits (86), Expect = 4e-13 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 4 AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61 |||||||||||| |||| |||||||||||||||||||||| |||| |||||||||| Sbjct 313 AAAGAAACTAACGAGGACTCCCTCAGTAACGGCGAGTGAAGCGGGACAAGCCCAGCGC 370 >seq400009 Length=239 Score = 75.2 bits (82), Expect = 5e-12 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| |||||||| ||||||||||||||||||| ||||||| |||| ||||| ||| Sbjct 196 GGAAAATAAACTAACGAGGATTCCCTCAGTAACGGAGAGTGAAGCGGGACAAGCCC-GCG 138 Query 61 CCGAATCC 68 | ||||| Sbjct 137 CTAAATCC 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229366913040