Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq174873 282 7e-74 seq8297 282 7e-74 seq267010 232 1e-58 >seq174873 Length=553 Score = 282 bits (312), Expect = 7e-74 Identities = 218/254 (86%), Gaps = 5/254 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 407 GTCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC-T 349 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG-- 132 ||| || | ||||| | |||| |||||||||||||||| | | | | | | | Sbjct 348 CAATCT-CGTGTGGCTAAACGCCACTAGTCCCTCTAAGAAGTTATCTCCGAGCTAGATGC 290 Query 133 TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192 |||| | ||||||||||| || | |||||||||||||||||||||||||||||||||| Sbjct 289 TCGA-GTAGCTATTTAGCAAGTAAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 231 Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 230 GCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGAAAGAGCTCTCAA 171 Query 253 TCTGTCCTCCCTCG 266 |||||| ||||| Sbjct 170 TCTGTCAATCCTCG 157 >seq8297 Length=10145 Score = 282 bits (312), Expect = 7e-74 Identities = 218/254 (86%), Gaps = 5/254 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 8783 GTCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC-T 8725 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG-- 132 ||| || | ||||| | |||| |||||||||||||||| | | | | | | | Sbjct 8724 CAATCT-CGTGTGGCTAAACGCCACTAGTCCCTCTAAGAAGTTATCTCCGAGCTAGATGC 8666 Query 133 TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192 |||| | ||||||||||| || | |||||||||||||||||||||||||||||||||| Sbjct 8665 TCGA-GTAGCTATTTAGCAAGTAAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 8607 Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 8606 GCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGAAAGAGCTCTCAA 8547 Query 253 TCTGTCCTCCCTCG 266 |||||| ||||| Sbjct 8546 TCTGTCAATCCTCG 8533 >seq267010 Length=354 Score = 232 bits (256), Expect = 1e-58 Identities = 183/215 (85%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 211 ACTCGCTGAATCCGACAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 152 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||| || | |||| | | |||| ||||||||||||||| ||| Sbjct 151 CCTGTTATTGCCTTC--CTGACTTTGGTTAAACACCAACAGTCCCTCTAAGAAGTCAGTT 94 Query 122 ACCAACC-ATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | | | ||| ||| ||||||||| |||||||||||||||||||| ||||||| Sbjct 93 ACGATTCGAGAATCGCATGA--CTATTTAGCCGGTTAAGGTCTCGTTCGTTAACGGAATT 36 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCC 214 ||||||||||||||||||||||||||||||||||| Sbjct 35 AACCAGACAAATCACTCCACCAACTAAGAACGGCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793108148961