Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq445936 131 2e-28 seq355038 105 8e-21 seq426695 73.4 5e-11 >seq445936 Length=213 Score = 131 bits (144), Expect = 2e-28 Identities = 95/109 (87%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||| ||||| | ||||||||| ||||||||||||| |||||||| Sbjct 120 CTAGAAACCAACAAAAT-GGGACCAAAGTCCTATTCCATTATTCCATGCTCATGTATTCA 62 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTG 114 || ||||||||||||||||||||||||| |||| ||||| |||||| Sbjct 61 AGCAATAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTG 13 >seq355038 Length=269 Score = 105 bits (116), Expect = 8e-21 Identities = 89/107 (83%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||||||| | ||||| || Sbjct 161 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCAACATTATTCAAGCT 219 Query 70 T-AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 | |||||||||||||||||||||||||| |||||||||| ||| || Sbjct 220 TTAAGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAAACTTCCCGG 266 >seq426695 Length=224 Score = 73.4 bits (80), Expect = 5e-11 Identities = 64/77 (83%), Gaps = 2/77 (3%) Strand=Plus/Minus Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC 128 |||||||||||||||||||||||||||| |||| ||||| ||| | |||| ||||||| Sbjct 223 GTAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCGTAAATCCTACGCACAC 164 Query 129 -CAATGAAG-GCATACG 143 ||| ||| ||| ||| Sbjct 163 TCAACAAAGAGCACACG 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592442231754