Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq445936 190 2e-46 seq355038 123 3e-26 >seq445936 Length=213 Score = 190 bits (210), Expect = 2e-46 Identities = 154/184 (84%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 6 CAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTA 65 |||||| ||||||||||||||||||||| ||||||||||||| ||||| |||||||| | Sbjct 13 CAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTATTGCTTGAATACATGA 72 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125 ||||||||||| ||||||||| | ||| | ||||||| |||||||||||||| ||| Sbjct 73 GCATGGAATAATGGAATAGGAC-TTTGGTCCCATTTTGTTGGTTTCTAGGACCG-AAGTA 130 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||||| || | ||| | | ||||| || ||||| |||||| |||||||||||||||| Sbjct 131 ATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGA 190 Query 186 TTTA 189 |||| Sbjct 191 TTTA 194 >seq355038 Length=269 Score = 123 bits (136), Expect = 3e-26 Identities = 141/184 (77%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACAT 63 || ||| ||||| ||||||||||||||| ||||||||||||| | ||| ||||| Sbjct 266 CCGGGAAGTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTAAAGCTTGAATAATG 207 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CC 122 | ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| ||| Sbjct 206 TTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAGCGCGAG 149 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| || | | | | |||||| || ||| | || | ||||||||||||| Sbjct 148 GTAATGATTAAGAGGAACGGACGGGGGCATCCGTACTGTGCCGTTAGAGGTGAAATTCTT 89 Query 183 GGAT 186 |||| Sbjct 88 GGAT 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509627726240