Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4955 123 4e-26 seq17483 114 2e-23 >seq4955 Length=947 Score = 123 bits (136), Expect = 4e-26 Identities = 161/219 (74%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 |||| | ||| ||||| |||| | | | || ||| | || |||| || ||| || Sbjct 444 TACAGAAGGCCGGGACTTAGTAATTTCAACCTGAGTGAGTTGCAATTACCAGAGATT-CC 386 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATTA 120 || || | || ||| |||| ||||| || |||||||||||||| | |||| ||||||| Sbjct 385 TCTTTCATGAGCAATAATTACAATGCTCAATCCCCATCACGATAACGATTTAAAAGATTT 326 Query 121 CCCGGACCTGT-CGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| || || | | | | || | ||| |||| |||| ||| |||||||||| Sbjct 325 CCCAGAACTTTTCAGTCCAG-----AAACTTGTTGTCGTTATCATTGTTGCGCGCGTGCA 271 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 |||| ||||||| |||||||||||||||||||||||||| Sbjct 270 GCCCTGAACATCGAAGGGCATCACAGACCTGTTATTGCC 232 >seq17483 Length=610 Score = 114 bits (126), Expect = 2e-23 Identities = 158/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 4 CAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTC 63 ||||||||| |||| | ||| | | || |||| | || |||| || ||| ||| Sbjct 380 CAAAGGGCAAGGACTGATTCATTACAACCTAAATGAGTTGCAATTACAAGAGATT-CCTA 438 Query 64 GTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATTACC 122 || | || ||| |||| ||||| || |||| | ||||||| | ||| ||||||| || Sbjct 439 TTTCATGAGCAATAATTACAATGCTCAATCCACCTCACGATAACGATTAAAAAGATTTCC 498 Query 123 CGGACCTGT-CGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGC 181 | || || | | | | || | |||||||| |||| |||||||||| ||| || Sbjct 499 CAGAACTTTTCAGTCCAG-----AAACTCGTTGTCGTTATCATTGTAGCGCGCATGCAGC 553 Query 182 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 || ||||||| |||||||||||||||||||||||||| Sbjct 554 CCTGAACATCGAAGGGCATCACAGACCTGTTATTGCC 590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751483391510