Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq61825 84.2 3e-14 seq17483 82.4 1e-13 seq4955 82.4 1e-13 seq70296 80.6 4e-13 seq49427 75.2 2e-11 seq49426 75.2 2e-11 seq49425 75.2 2e-11 >seq61825 Length=2603 Score = 84.2 bits (92), Expect = 3e-14 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244 |||| |||||||||| |||||||| |||||||||||||||| ||| | |||| |||||| Sbjct 2185 GACAGATCACTCCACGAACTAAGATCGGCCATGCACCACCAACCACCGTATCATGAAAGA 2244 Query 245 GCTATCAATCTGTC 258 |||| | |||||| Sbjct 2245 TCTATTAGTCTGTC 2258 >seq17483 Length=610 Score = 82.4 bits (90), Expect = 1e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 ||| |||||||||| ||| |||| ||||||| |||||||||||||||||||||||||| Sbjct 533 TCATTGTAGCGCGCATGCAGCCCTGAACATCGAAGGGCATCACAGACCTGTTATTGCC 590 >seq4955 Length=947 Score = 82.4 bits (90), Expect = 1e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 ||| ||| |||||||||| |||| ||||||| |||||||||||||||||||||||||| Sbjct 289 TCATTGTTGCGCGCGTGCAGCCCTGAACATCGAAGGGCATCACAGACCTGTTATTGCC 232 >seq70296 Length=608 Score = 80.6 bits (88), Expect = 4e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 |||||||||| ||||||||||||||||||||||||| | | | |||| |||||| |||| Sbjct 279 ATCACTCCACGAACTAAGAACGGCCATGCACCACCATCTACCGTATCATGAAAGATCTAT 220 Query 250 CAATCTGTC 258 | |||||| Sbjct 219 TAGTCTGTC 211 >seq49427 Length=1021 Score = 75.2 bits (82), Expect = 2e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 |||||||||| ||||||||||||||||||||||||| | | | |||| |||||| |||| Sbjct 330 ATCACTCCACGAACTAAGAACGGCCATGCACCACCAACTACCGTATCATGAAAGATCTAT 389 Query 250 CAATCTGTC 258 | ||||| Sbjct 390 TAGACTGTC 398 >seq49426 Length=821 Score = 75.2 bits (82), Expect = 2e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 |||||||||| ||||||||||||||||||||||||| | | | |||| |||||| |||| Sbjct 404 ATCACTCCACGAACTAAGAACGGCCATGCACCACCAACTACCGTATCATGAAAGATCTAT 345 Query 250 CAATCTGTC 258 | ||||| Sbjct 344 TAGACTGTC 336 >seq49425 Length=1460 Score = 75.2 bits (82), Expect = 2e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 |||||||||| ||||||||||||||||||||||||| | | | |||| |||||| |||| Sbjct 404 ATCACTCCACGAACTAAGAACGGCCATGCACCACCAACTACCGTATCATGAAAGATCTAT 345 Query 250 CAATCTGTC 258 | ||||| Sbjct 344 TAGACTGTC 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796252614834