Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4955 141 2e-31 seq17483 136 7e-30 seq27433 73.4 7e-11 >seq4955 Length=947 Score = 141 bits (156), Expect = 2e-31 Identities = 137/174 (79%), Gaps = 8/174 (5%) Strand=Plus/Plus Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 |||||||||||||||||||||||||| ||||||| |||| |||||||||| ||| ||| | Sbjct 232 GGCAATAACAGGTCTGTGATGCCCTTCGATGTTCAGGGCTGCACGCGCGCAACAATGATA 291 Query 173 GAGCCAACGAGTTCATCACCTTGGCCGG--AAGGTCTGGGTAATCTTGTTAAACTCTGTC 230 | |||| |||| || ||| | | ||| |||||| |||||| | || | | || Sbjct 292 ACGACAACAAGTT--TC----TGGACTGAAAAGTTCTGGGAAATCTTTTAAATCGTTATC 345 Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 ||| ||||||| |||||||| ||||||||||| | || ||||||| || |||| Sbjct 346 GTGATGGGGATTGAGCATTGTAATTATTGCTCATGAAAGAGGAATCTCTGGTAA 399 >seq17483 Length=610 Score = 136 bits (150), Expect = 7e-30 Identities = 136/174 (78%), Gaps = 8/174 (5%) Strand=Plus/Minus Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 |||||||||||||||||||||||||| ||||||| |||| ||| |||||||||| ||| | Sbjct 590 GGCAATAACAGGTCTGTGATGCCCTTCGATGTTCAGGGCTGCATGCGCGCTACAATGATA 531 Query 173 GAGCCAACGAGTTCATCACCTTGGCCGG--AAGGTCTGGGTAATCTTGTTAAACTCTGTC 230 | ||||||||| || ||| | | ||| |||||| |||||| |||| | | || Sbjct 530 ACGACAACGAGTT--TC----TGGACTGAAAAGTTCTGGGAAATCTTTTTAATCGTTATC 477 Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 ||| | |||| |||||||| ||||||||||| | || |||||| || |||| Sbjct 476 GTGAGGTGGATTGAGCATTGTAATTATTGCTCATGAAATAGGAATCTCTTGTAA 423 >seq27433 Length=1804 Score = 73.4 bits (80), Expect = 7e-11 Identities = 60/73 (82%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 |||||||||| |||| |||||| ||| ||||||| |||| |||||||||||||| | | | Sbjct 1685 GGCAATAACAAGTCTATGATGCTCTTCGATGTTCGGGGCTGCACGCGCGCTACAATAAAA 1744 Query 173 GAGCCAACGAGTT 185 | || |||||| Sbjct 1745 ACGACAGCGAGTT 1757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946528302592