Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq39920 181 3e-43 seq26324 170 6e-40 seq26323 170 6e-40 seq26322 170 6e-40 seq26321 170 6e-40 seq38245 161 3e-37 seq38529 127 7e-27 seq38528 127 7e-27 seq42584 123 8e-26 seq63512 118 3e-24 seq41706 118 3e-24 seq14612 118 3e-24 seq25431 78.8 3e-12 >seq39920 Length=1007 Score = 181 bits (200), Expect = 3e-43 Identities = 111/118 (94%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 ||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| Sbjct 795 GACGAGGCATTTGGCTATCTTGAGAGAGTCATAGTTACACCCGCCGTTTACCCGCGCTTG 854 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 855 GTTGTGTTTCCACACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 912 Score = 109 bits (120), Expect = 2e-21 Identities = 62/63 (98%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 60 Query 429 GCT 431 ||| Sbjct 61 GCT 63 >seq26324 Length=1041 Score = 170 bits (188), Expect = 6e-40 Identities = 147/182 (81%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 251 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 310 |||||||||||||| | || | || ||||||||||||||||||||| ||||| ||| Sbjct 587 ACACCTCTCAAGTCTCCTAACCATATCAAACTAGAGTCAAGCTCAACAGGATCTTCGTTC 528 Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370 || | || || | |||||| ||| ||| ||||||||||||||||| || ||||| Sbjct 527 CCAGTTGTCTCAGTTAAGCCCTTTCTGTTGACTGTGGTTTCGCTAGATGAAAGGTAGGGG 468 Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 |||||| | |||||| |||||||||| || |||||||||||||||||||| |||||| | Sbjct 467 CAGTGGATACCTCGTTGATCCATTCATTCGTGTCACTAATTAGATGACGAGACATTTGCC 408 Query 431 TA 432 || Sbjct 407 TA 406 Score = 75.2 bits (82), Expect = 4e-11 Identities = 83/111 (75%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| | |||||| || | ||||| | | || |||| | |||| ||||||| |||| Sbjct 983 CTTATTCTCTACCGGTGGTTTCTATCCACCGTGAGCTCACCTTTGGACACCCTCGTTGCA 924 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCA 117 |||| | ||| ||||||||||||| ||||||| ||| || |||||||| Sbjct 923 TTTTAGAGGGTGTACCGCCCCAGCCAATCTCCCCATCTGCCACTGTCATCA 873 >seq26323 Length=1017 Score = 170 bits (188), Expect = 6e-40 Identities = 147/182 (81%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 251 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 310 |||||||||||||| | || | || ||||||||||||||||||||| ||||| ||| Sbjct 373 ACACCTCTCAAGTCTCCTAACCATATCAAACTAGAGTCAAGCTCAACAGGATCTTCGTTC 432 Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370 || | || || | |||||| ||| ||| ||||||||||||||||| || ||||| Sbjct 433 CCAGTTGTCTCAGTTAAGCCCTTTCTGTTGACTGTGGTTTCGCTAGATGAAAGGTAGGGG 492 Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 |||||| | |||||| |||||||||| || |||||||||||||||||||| |||||| | Sbjct 493 CAGTGGATACCTCGTTGATCCATTCATTCGTGTCACTAATTAGATGACGAGACATTTGCC 552 Query 431 TA 432 || Sbjct 553 TA 554 >seq26322 Length=1025 Score = 170 bits (188), Expect = 6e-40 Identities = 147/182 (81%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 251 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 310 |||||||||||||| | || | || ||||||||||||||||||||| ||||| ||| Sbjct 373 ACACCTCTCAAGTCTCCTAACCATATCAAACTAGAGTCAAGCTCAACAGGATCTTCGTTC 432 Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370 || | || || | |||||| ||| ||| ||||||||||||||||| || ||||| Sbjct 433 CCAGTTGTCTCAGTTAAGCCCTTTCTGTTGACTGTGGTTTCGCTAGATGAAAGGTAGGGG 492 Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 |||||| | |||||| |||||||||| || |||||||||||||||||||| |||||| | Sbjct 493 CAGTGGATACCTCGTTGATCCATTCATTCGTGTCACTAATTAGATGACGAGACATTTGCC 552 Query 431 TA 432 || Sbjct 553 TA 554 >seq26321 Length=1016 Score = 170 bits (188), Expect = 6e-40 Identities = 147/182 (81%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 251 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 310 |||||||||||||| | || | || ||||||||||||||||||||| ||||| ||| Sbjct 373 ACACCTCTCAAGTCTCCTAACCATATCAAACTAGAGTCAAGCTCAACAGGATCTTCGTTC 432 Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370 || | || || | |||||| ||| ||| ||||||||||||||||| || ||||| Sbjct 433 CCAGTTGTCTCAGTTAAGCCCTTTCTGTTGACTGTGGTTTCGCTAGATGAAAGGTAGGGG 492 Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 |||||| | |||||| |||||||||| || |||||||||||||||||||| |||||| | Sbjct 493 CAGTGGATACCTCGTTGATCCATTCATTCGTGTCACTAATTAGATGACGAGACATTTGCC 552 Query 431 TA 432 || Sbjct 553 TA 554 >seq38245 Length=616 Score = 161 bits (178), Expect = 3e-37 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| || |||||||| ||| ||| | || | | |||| ||||| |||| Sbjct 492 CTCCCACCTAAGCTACACCTTTCATGTCTCCTAACCATAAAAAAATAGAATCAAGTTCAA 433 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||| | || || | |||||||||| ||| ||||||||| ||||| Sbjct 432 AAGGGTCTTCTTTCCTCACTTCCTCAGTTAAGCCCGTTCTGTTGACTGTGGTTTTGCTAG 373 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 || | ||||| ||||||||| | |||||| ||| ||||||||| |||||||| |||||| Sbjct 372 ATGGAAGATAAGGACAGTGGATACCTCGTTGATCAATTCATGCGGGTCACTAAATAGATG 313 Query 417 ACGAGGCATTTGGCTAC 433 ||||||||||| ||||| Sbjct 312 ACGAGGCATTTAGCTAC 296 >seq38529 Length=9335 Score = 127 bits (140), Expect = 7e-27 Identities = 153/205 (75%), Gaps = 11/205 (5%) Strand=Plus/Plus Query 333 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC- 391 ||||||| || || || ||||||||| | || ||| |||||| ||| ||||| |||| Sbjct 2122 TTCCCTTAGCAGTAGTCTCGCTAGATGGAAGGTAGAGACAGT---AATATCGTTGATCCC 2178 Query 392 ----ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 ||||| | || |||| ||| | || ||||| ||||| ||| || ||||||||| Sbjct 2179 ATCCATTCACGAGCTTCACGAATCAAATTACGAGACATTTAGCTGTCTC--GAGAGTCAT 2236 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||| |||||||||||||| | ||||||| ||||| || ||||||||||||| | Sbjct 2237 -GTTAAATCCGCCGTTTACCCGGGTTTGGTTGTGTTTCTAAACCCTGACATTCAGAGCTC 2295 Query 508 TGGGCAGAAATCACATTGCGTCAAC 532 | |||||| || ||| | ||||| Sbjct 2296 TAAGCAGAATCCATATTACTTCAAC 2320 >seq38528 Length=5412 Score = 127 bits (140), Expect = 7e-27 Identities = 153/205 (75%), Gaps = 11/205 (5%) Strand=Plus/Minus Query 333 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC- 391 ||||||| || || || ||||||||| | || ||| |||||| ||| ||||| |||| Sbjct 2409 TTCCCTTAGCAGTAGTCTCGCTAGATGGAAGGTAGAGACAGT---AATATCGTTGATCCC 2353 Query 392 ----ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 ||||| | || |||| ||| | || ||||| ||||| ||| || ||||||||| Sbjct 2352 ATCCATTCACGAGCTTCACGAATCAAATTACGAGACATTTAGCTGTCTC--GAGAGTCAT 2295 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||| |||||||||||||| | ||||||| ||||| || ||||||||||||| | Sbjct 2294 -GTTAAATCCGCCGTTTACCCGGGTTTGGTTGTGTTTCTAAACCCTGACATTCAGAGCTC 2236 Query 508 TGGGCAGAAATCACATTGCGTCAAC 532 | |||||| || ||| | ||||| Sbjct 2235 TAAGCAGAATCCATATTACTTCAAC 2211 >seq42584 Length=833 Score = 123 bits (136), Expect = 8e-26 Identities = 98/117 (84%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || ||||||| |||| ||| || ||| |||||||| |||||||||||||| || ||| Sbjct 135 ACAAGGCATTATGCTATCTT--GATAGTTATAGTTACACCCGCCGTTTACCCATGCCTGG 78 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||| ||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 77 ATGTGTTTCCACACTTTGACATTCCGAGCAATGGGCAGAAATCACATTGCGTCAACA 21 >seq63512 Length=1313 Score = 118 bits (130), Expect = 3e-24 Identities = 97/117 (83%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || ||||||| |||| ||| || ||| |||||||| |||||||||||||| || ||| Sbjct 1159 ACAAGGCATTATGCTATCTT--GATAGTTATAGTTACACCCGCCGTTTACCCATGCCTGG 1216 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||| ||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct 1217 ATGTGTTTCCACACTTTGACATTCGGAGCATTGTGCAGAAATCACATTGCGTCAACA 1273 >seq41706 Length=1793 Score = 118 bits (130), Expect = 3e-24 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||| ||| ||| ||| |||||||| ||| | |||| || |||||||||||| ||| Sbjct 979 CTCACACCTATGCTAGACCTCTCATGTCTCCTAACAACATCAAGCTAGAGTCAAGCCCAA 1038 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||| |||||||||| ||||| | ||||| |||| |||| ||| || ||| |||| Sbjct 1039 TAGGTTCTTCTTTCCTCGCTGTCTAAATCAAGCATGTTCTCTTGACTGAGGATTCACTAG 1098 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 || | | || | ||||| | |||||| | ||||| |||| ||| |||||||||| | Sbjct 1099 ATGGAAAATTGAGACAGCAGATTCCTCGTTGAACCATTTATGCTCGTAACTAATTAGACG 1158 Query 417 ACGAG 421 ||||| Sbjct 1159 ACGAG 1163 >seq14612 Length=833 Score = 118 bits (130), Expect = 3e-24 Identities = 97/117 (83%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || ||||||| |||| ||| || ||| |||||||| |||||||||||||| || ||| Sbjct 699 ACAAGGCATTATGCTATCTT--GATAGTTATAGTTACACCCGCCGTTTACCCATGCCTGG 756 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||| || |||||||||| ||||| |||||||||||||||||||||||||| Sbjct 757 ATGTGTTTCCACATTTTGACATTCCGAGCAATGGGCAGAAATCACATTGCGTCAACA 813 >seq25431 Length=649 Score = 78.8 bits (86), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||| ||| ||| ||| || ||||| ||| | |||| || ||||||||||||| ||| Sbjct 516 CTCACACCTATGCTAGACATCTCATGTCCCTA-ACAACATCAAACTAGAGTCAAGCCCAA 574 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||| ||| ||||| | ||||| |||| |||| ||| || ||| |||| Sbjct 575 TAGGGTCTTCTGTCCTCGCTGTCTAAATCAAGCATGTTCTCTTGACTGAGGATTCACTAG 634 Query 357 ATAGTAGATAGGGAC 371 || | | || | ||| Sbjct 635 ATGGAAAATTGAGAC 649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634040414272