Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq61479 96.9 3e-15 >seq61479 Length=12598 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 61258 GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317 ||| ||||| | | || || || | | | || || | ||||||||||| ||||| ||| Sbjct 3783 GAATGTTTCTTGAATGAAGTTCAGGCGACAGAAGCAAGATGTTTCTACGGGTTCCAAATT 3842 Query 61318 GCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAG 61377 || |||| ||| ||||||| || ||||||||| | | || ||||||||||| | || Sbjct 3843 GCGGTGGAAAATATCCACTCTGAAATGTACAGTTTGTTGATTGATACGTACATTAAAGAA 3902 Query 61378 CGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA 61437 | ||||| | | |||||||| |||||||| || | || | || ||| || Sbjct 3903 ATCGAAGAACGAAATAGGTTGTTCAAAGCCATCGAAACCCTTCCTTCTGTCAAGAAAAAG 3962 Query 61438 GCGGATTGGGCCTTCAATTGGAT 61460 || || |||||| | || ||||| Sbjct 3963 GCTGAATGGGCCCTAAACTGGAT 3985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397224396140960