Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq26499 224 1e-56 >seq26499 Length=792257 Score = 224 bits (248), Expect = 1e-56 Identities = 210/258 (81%), Gaps = 7/258 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| | Sbjct 256528 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 256471 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| ||| | |||||||| |||||||||||||| | | |||| | ||| Sbjct 256470 CTCGTTCAAGGGAGATAATTGCAACTCCCTATCCCCATCACGGAGGAGGTTCAGCGGATT 256411 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||||| ||||||||| | | || || ||| | | ||||||||||||||||| Sbjct 256410 ACCCAGACCTTCCGGCCAAGGGCAGTGTACCCGCTGATTCCGCCAGTGTAGCGCGCGTGC 256351 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 ||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||| Sbjct 256350 GGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGTGG-CTAAA 256293 Query 239 AGGC-CATCTCCCTCGAA 255 | | | | |||||| || Sbjct 256292 CGCCACTTGTCCCTCTAA 256275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751767630355