Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015
-03-10] 31,897 sequences; 990,915,289 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq26499 224 1e-56
>seq26499
Length=792257
Score = 224 bits (248), Expect = 1e-56
Identities = 210/258 (81%), Gaps = 7/258 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |
Sbjct 256528 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 256471
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119
|||||| ||| | |||||||| |||||||||||||| | | |||| | |||
Sbjct 256470 CTCGTTCAAGGGAGATAATTGCAACTCCCTATCCCCATCACGGAGGAGGTTCAGCGGATT 256411
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| ||||| ||||||||| | | || || ||| | | |||||||||||||||||
Sbjct 256410 ACCCAGACCTTCCGGCCAAGGGCAGTGTACCCGCTGATTCCGCCAGTGTAGCGCGCGTGC 256351
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| |||||
Sbjct 256350 GGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGTGG-CTAAA 256293
Query 239 AGGC-CATCTCCCTCGAA 255
| | | | |||||| ||
Sbjct 256292 CGCCACTTGTCCCTCTAA 256275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751767630355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |