Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq26499 111 7e-23 seq2959 111 7e-23 >seq26499 Length=792257 Score = 111 bits (122), Expect = 7e-23 Identities = 87/102 (85%), Gaps = 3/102 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| || Sbjct 257736 GGAAAAGAAACTAACCAGGATTCCCTCAGTAGCGGCGAGTGAAGCGGGAAGAGCCCATCG 257795 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGC-GGGACATGTGGCGT 101 ||||||||| | | || | ||| | ||||| |||||||| Sbjct 257796 CCGAATCCCAG--CGGCCCTTAGGCTCTGGGACCTGTGGCGT 257835 >seq2959 Length=164602 Score = 111 bits (122), Expect = 7e-23 Identities = 87/102 (85%), Gaps = 3/102 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| || Sbjct 44384 GGAAAAGAAACTAACCAGGATTCCCTCAGTAGCGGCGAGTGAAGCGGGAAGAGCCCATCG 44443 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGC-GGGACATGTGGCGT 101 ||||||||| | | || | ||| | ||||| |||||||| Sbjct 44444 CCGAATCCCAG--CGGCCCTTAGGCTCTGGGACCTGTGGCGT 44483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230331102480