Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq26499 269 4e-70 >seq26499 Length=792257 Score = 269 bits (298), Expect = 4e-70 Identities = 219/261 (84%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||| || || |||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 256383 TACCCGCTGATTCCGCCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAG 256324 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 |||||||||||| |||| || | | |||| | |||| | |||||||||||||| | Sbjct 256323 ACCTGTTATTGC-TCAATCTCGCGT-GGCTAAACGCCACTTGTCCCTCTAAGAAGTT-GA 256267 Query 121 CACCAACCATAGTCGATGGGGC---TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 | | ||| | | ||| || ||||||||| | | ||||||||||||||||||| Sbjct 256266 CGCGCACCGCGGCGGGTGGCGCAACTATTTAGCAAGCCAGAGTCTCGTTCGTTATCGGAA 256207 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 256206 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCA 256147 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||| Sbjct 256146 AGAAAGAGCTCTCAATCTGTC 256126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796553787057