Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015
-03-10] 31,897 sequences; 990,915,289 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq26499 269 4e-70
>seq26499
Length=792257
Score = 269 bits (298), Expect = 4e-70
Identities = 219/261 (84%), Gaps = 6/261 (2%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
||| || || |||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 256383 TACCCGCTGATTCCGCCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAG 256324
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
|||||||||||| |||| || | | |||| | |||| | |||||||||||||| |
Sbjct 256323 ACCTGTTATTGC-TCAATCTCGCGT-GGCTAAACGCCACTTGTCCCTCTAAGAAGTT-GA 256267
Query 121 CACCAACCATAGTCGATGGGGC---TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
| | ||| | | ||| || ||||||||| | | |||||||||||||||||||
Sbjct 256266 CGCGCACCGCGGCGGGTGGCGCAACTATTTAGCAAGCCAGAGTCTCGTTCGTTATCGGAA 256207
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 256206 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCA 256147
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| ||||||||||
Sbjct 256146 AGAAAGAGCTCTCAATCTGTC 256126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796553787057
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |