Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015
-03-10] 31,897 sequences; 990,915,289 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq30965 114 1e-23
seq26499 114 1e-23
>seq30965
Length=529826
Score = 114 bits (126), Expect = 1e-23
Identities = 136/179 (76%), Gaps = 4/179 (2%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCA 68
|| ||||||||||||||||| ||| ||||||||||||||| || ||| | | ||
Sbjct 486 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCTCGCGCCTGAACAGCAGAGCA 427
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127
||||||||| ||||||||| | |||||||||| || ||||| | ||| | | |||||
Sbjct 426 TGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACTCGAGGTAAT 369
Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
||| || | ||| | |||||| | ||||| ||| | |||||||||||||||||
Sbjct 368 GATTAAGAGGGACTGACGGGGGCATTCGTATTGCGGTGTGAGAGGTGAAATTCTTGGAT 310
>seq26499
Length=792257
Score = 114 bits (126), Expect = 1e-23
Identities = 136/179 (76%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCA 68
|| ||||||||||||||||| ||| ||||||||||||||| || ||| | | ||
Sbjct 255636 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCTCGCGCCTGAACAGCAGAGCA 255695
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127
||||||||| ||||||||| | |||||||||| || ||||| | ||| | | |||||
Sbjct 255696 TGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACTCGAGGTAAT 255753
Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
||| || | ||| | |||||| | ||||| ||| | |||||||||||||||||
Sbjct 255754 GATTAAGAGGGACTGACGGGGGCATTCGTATTGCGGTGTGAGAGGTGAAATTCTTGGAT 255812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511841790880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |