Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq30965 114 1e-23 seq26499 114 1e-23 >seq30965 Length=529826 Score = 114 bits (126), Expect = 1e-23 Identities = 136/179 (76%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCA 68 || ||||||||||||||||| ||| ||||||||||||||| || ||| | | || Sbjct 486 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCTCGCGCCTGAACAGCAGAGCA 427 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||||||||| | |||||||||| || ||||| | ||| | | ||||| Sbjct 426 TGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACTCGAGGTAAT 369 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| || | ||| | |||||| | ||||| ||| | ||||||||||||||||| Sbjct 368 GATTAAGAGGGACTGACGGGGGCATTCGTATTGCGGTGTGAGAGGTGAAATTCTTGGAT 310 >seq26499 Length=792257 Score = 114 bits (126), Expect = 1e-23 Identities = 136/179 (76%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCA 68 || ||||||||||||||||| ||| ||||||||||||||| || ||| | | || Sbjct 255636 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCTCGCGCCTGAACAGCAGAGCA 255695 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||||||||| | |||||||||| || ||||| | ||| | | ||||| Sbjct 255696 TGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACTCGAGGTAAT 255753 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| || | ||| | |||||| | ||||| ||| | ||||||||||||||||| Sbjct 255754 GATTAAGAGGGACTGACGGGGGCATTCGTATTGCGGTGTGAGAGGTGAAATTCTTGGAT 255812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511841790880