Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq26499 259 9e-67 >seq26499 Length=792257 Score = 259 bits (286), Expect = 9e-67 Identities = 216/259 (83%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | | || ||||| |||||||||||||||| Sbjct 256271 CTTCTTAGAGGGACAAGTGGCGTTTAGCC-ACGCGAGATTGAG-CAATAACAGGTCTGTG 256328 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA-TC 189 |||||||||||||||| |||||||||||||||||||||| | || || || || || | Sbjct 256329 ATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACACTGGCGGAATCAGCGGGTACACTG 256388 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||||||||||||||||||||||||| | || ||| |||| ||||||||| | || Sbjct 256389 CCCTTGGCCGGAAGGTCTGGGTAATCCGCTGAACCTCCTCCGTGATGGGGATAGGGAGTT 256448 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||||| | ||| |||||||||| || |||||||||| ||||||||| ||||||||| Sbjct 256449 GCAATTATCTCCCTTGAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGAT 256508 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 256509 TACGTCCCTGCCCTTTGTA 256527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946897871616