Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015
-03-10] 31,897 sequences; 990,915,289 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq26499 259 9e-67
>seq26499
Length=792257
Score = 259 bits (286), Expect = 9e-67
Identities = 216/259 (83%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| | | || ||||| ||||||||||||||||
Sbjct 256271 CTTCTTAGAGGGACAAGTGGCGTTTAGCC-ACGCGAGATTGAG-CAATAACAGGTCTGTG 256328
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA-TC 189
|||||||||||||||| |||||||||||||||||||||| | || || || || || |
Sbjct 256329 ATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACACTGGCGGAATCAGCGGGTACACTG 256388
Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249
||||||||||||||||||||||||| | || ||| |||| ||||||||| | ||
Sbjct 256389 CCCTTGGCCGGAAGGTCTGGGTAATCCGCTGAACCTCCTCCGTGATGGGGATAGGGAGTT 256448
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
|||||||| | ||| |||||||||| || |||||||||| ||||||||| |||||||||
Sbjct 256449 GCAATTATCTCCCTTGAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGAT 256508
Query 310 TACGTCCCTGCCCTTTGTA 328
|||||||||||||||||||
Sbjct 256509 TACGTCCCTGCCCTTTGTA 256527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946897871616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |