Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015
-03-10] 31,897 sequences; 990,915,289 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq26499 497 3e-138
seq5480 497 3e-138
seq30965 491 1e-136
>seq26499
Length=792257
Score = 497 bits (550), Expect = 3e-138
Identities = 428/517 (83%), Gaps = 16/517 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||
Sbjct 255414 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 255355
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255354 TCCCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 255295
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||
Sbjct 255294 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTGACGACCATGGT 255235
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| || | ||||||||||||||||||||||||| ||| ||| || || |||||||
Sbjct 255234 AGGCGCATAACGTACCATCGAAAGTTGATAGGGCAGACATTCGAAGGATCCGTCGCCGGT 255175
Query 240 TC-AAGGCCATGCGATTCGTTAAGTTATTATGA-ATCACCAAGGAGCC---CCGA-AGGG 293
| ||| || |||||| | | ||||| || |||||| | | | |||| | |
Sbjct 255174 GCAAAGACCGTGCGATCGGCTGTGTTATCCAGAGTTCACCAGTGTGGCCGGCCGAGACCG 255115
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTA-GCATGTA 350
| |||| || | |||||||| ||| ||||| | ||||||| | || | |||||||
Sbjct 255114 GGCTGGTCTTGTTCCTAATAAAAGCACGCCTTCTGGAAAGTCGGCGCTTGGACGCATGTA 255055
Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACT--ATCAAATAAACGATAA 408
||||||||||||||||||| ||||||||||| | || ||| ||| ||| ||| ||||
Sbjct 255054 TTAGCTCTAGAATTACCACAGTTATCCATGTCG-GGGGGACTCGATCCAATGAACCATAA 254996
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATA-GATTGCTTATACTTAGACATGCAT 467
||||||||||||||||| ||||||||| || | | || |||| |||||||||||||||
Sbjct 254995 CTGATTTAATGAGCCATCCGCAGTTTCGCTCGAGACGA--GCTTGTACTTAGACATGCAT 254938
Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||
Sbjct 254937 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 254901
>seq5480
Length=169542
Score = 497 bits (550), Expect = 3e-138
Identities = 428/517 (83%), Gaps = 16/517 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||
Sbjct 14359 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 14418
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14419 TCCCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 14478
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||
Sbjct 14479 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTGACGACCATGGT 14538
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| || | ||||||||||||||||||||||||| ||| ||| || || |||||||
Sbjct 14539 AGGCGCATAACGTACCATCGAAAGTTGATAGGGCAGACATTCGAAGGATCCGTCGCCGGT 14598
Query 240 TC-AAGGCCATGCGATTCGTTAAGTTATTATGA-ATCACCAAGGAGCC---CCGA-AGGG 293
| ||| || |||||| | | ||||| || |||||| | | | |||| | |
Sbjct 14599 GCAAAGACCGTGCGATCGGCTGTGTTATCCAGAGTTCACCAGTGTGGCCGGCCGAGACCG 14658
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTA-GCATGTA 350
| |||| || | |||||||| ||| ||||| | ||||||| | || | |||||||
Sbjct 14659 GGCTGGTCTTGTTCCTAATAAAAGCACGCCTTCTGGAAAGTCGGCGCTTGGACGCATGTA 14718
Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACT--ATCAAATAAACGATAA 408
||||||||||||||||||| ||||||||||| | || ||| ||| ||| ||| ||||
Sbjct 14719 TTAGCTCTAGAATTACCACAGTTATCCATGTCG-GGGGGACTCGATCCAATGAACCATAA 14777
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATA-GATTGCTTATACTTAGACATGCAT 467
||||||||||||||||| ||||||||| || | | || |||| |||||||||||||||
Sbjct 14778 CTGATTTAATGAGCCATCCGCAGTTTCGCTCGAGACGA--GCTTGTACTTAGACATGCAT 14835
Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||
Sbjct 14836 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 14872
>seq30965
Length=529826
Score = 491 bits (544), Expect = 1e-136
Identities = 427/517 (83%), Gaps = 16/517 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||
Sbjct 708 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 767
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 768 TCCCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 827
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||
Sbjct 828 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTGACGACCATGGT 887
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| || | ||||||||||||||||||||||||| ||| ||| || || |||||||
Sbjct 888 AGGCGCATAACGTACCATCGAAAGTTGATAGGGCAGACATTCGAAGGATCCGTCGCCGGT 947
Query 240 TC-AAGGCCATGCGATTCGTTAAGTTATTATGA-ATCACCAAGGAGCC---CCGA-AGGG 293
| ||| || |||||| | | ||||| || |||||| | | | |||| | |
Sbjct 948 GCAAAGACCGTGCGATCGGCTGTGTTATCCAGAGTTCACCAGTGTGGCCGGCCGAGACCG 1007
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTA-GCATGTA 350
| |||| || | |||||||| ||| ||||| | ||||||| | || | |||||||
Sbjct 1008 GGCTGGTCTTGTTCCTAATAAAAGCACGCCTTCTGGAAAGTCGGCGCTTGGACGCATGTA 1067
Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACT--ATCAAATAAACGATAA 408
||||||||||||||||||| ||||||||||| | || ||| ||| ||| ||| ||||
Sbjct 1068 TTAGCTCTAGAATTACCACAGTTATCCATGTCG-GGGGGACTCGATCCAATGAACCATAA 1126
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACT-GTATAGATTGCTTATACTTAGACATGCAT 467
||||||||||||||||| ||||||||| || | || |||| |||||||||||||||
Sbjct 1127 CTGATTTAATGAGCCATCCGCAGTTTCGCTCGGGACGA--GCTTGTACTTAGACATGCAT 1184
Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509918227712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |