Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq8724 93.3 2e-13 >seq8724 Length=135301 Score = 93.3 bits (102), Expect = 2e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 349082 ATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGG 349141 ||||||||||| | ||| | || ||||| ||||||||||||| || ||||| || ||| Sbjct 68013 ATCTCCTTGAGACGGGGTACACCAAGGGTTACGTTCTTGGCCGACACACCGGCGAAATGG 67954 Query 349142 AAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCT 349201 ||||| | |||||||| ||| ||| || || || | | ||||| | || ||| || Sbjct 67953 AAGGTGTTGAGGGTCATCTGAGTGGCAGGTTCTCCCAGGGACTGGGCAGCAAGGGCTCCC 67894 Query 349202 ACCATCTCGCC 349212 |||||||| || Sbjct 67893 ACCATCTCACC 67883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083866427842806