Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5161 295 1e-77 seq2506 131 3e-28 >seq5161 Length=2011 Score = 295 bits (326), Expect = 1e-77 Identities = 205/229 (90%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||| | Sbjct 468 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGTATT-C 411 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||||||||| | ||||| |||||| Sbjct 410 CTCGTTGAAGAACAATAATTGCAATGTTCTATCCCCATCACGACAGAGTTTCACAAGATT 351 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| ||||||||||| |||||||| || | ||||||||||||||||||| Sbjct 350 ACCCAGGCCTTCCGGCCAAGGTGGTAGACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 291 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 242 >seq2506 Length=20947 Score = 131 bits (144), Expect = 3e-28 Identities = 162/218 (74%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || || ||| || || | ||| ||||||| ||| | Sbjct 10948 GTACAAAGGGCAGGGACTTAATCTGCGCATTCTA-ATAAAATACGCATACTAGGGATT-C 10891 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||| || | |||| ||| || ||| | || |||||||||||||| | || |||||||| Sbjct 10890 CTCTTTCATGACCGACAGTTACAACGGTCAATCCCCATCACGATAACGATT-AAAGATTA 10832 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| || ||| | || | |||||||| |||| |||||||||||||| | Sbjct 10831 CCCACGTCTTTCGACGCAG-----ACACTCGTTGTCGTTATCATTGTAGCGCGCGTGCAG 10777 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 ||| ||||||| ||||||||||| |||||||||| ||| Sbjct 10776 CCCTGAACATCGAAGGGCATCACTGACCTGTTATAGCC 10739 Score = 131 bits (144), Expect = 3e-28 Identities = 162/218 (74%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || || ||| || || | ||| ||||||| ||| | Sbjct 13521 GTACAAAGGGCAGGGACTTAATCTGCGCATTCTA-ATAAAATACGCATACTAGGGATT-C 13464 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||| || | |||| ||| || ||| | || |||||||||||||| | || |||||||| Sbjct 13463 CTCTTTCATGACCGACAGTTACAACGGTCAATCCCCATCACGATAACGATT-AAAGATTA 13405 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| || ||| | || | |||||||| |||| |||||||||||||| | Sbjct 13404 CCCACGTCTTTCGACGCAG-----ACACTCGTTGTCGTTATCATTGTAGCGCGCGTGCAG 13350 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 ||| ||||||| ||||||||||| |||||||||| ||| Sbjct 13349 CCCTGAACATCGAAGGGCATCACTGACCTGTTATAGCC 13312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751958060255