Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq5161 239 2e-60 seq3354 149 3e-33 seq2506 149 3e-33 >seq5161 Length=2011 Score = 239 bits (264), Expect = 2e-60 Identities = 170/194 (88%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| | | ||||| ||||||||||||||||||||||||||| || |||| ||||||| Sbjct 1443 TGTGATACACTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAATTGGGTGGTAAAT 1502 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 1503 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 1562 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||||||||||||||||||||| || || |||||||||||||| ||||||| ||||| Sbjct 1563 TGAAAAGCACTTTGGAAAGAGAGTT-AACAGTACGTGAAATTGTTGGAAGGGAAACGCTT 1621 Query 203 GCAACCAGACTTGC 216 | | ||||||||| Sbjct 1622 GAAGTCAGACTTGC 1635 Score = 197 bits (218), Expect = 6e-48 Identities = 161/193 (83%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAA-CACGGACCAAGGAGTCTA 437 ||||||||||| | ||||| | ||| || ||||||||| || |||||||||||||||||| Sbjct 1821 TAGGATGCTGGTGGAATGGCTTTAAACGACCCGTCTTGTAAACACGGACCAAGGAGTCTA 1880 Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497 |||| ||||||||||||||||||||||||| |||| |||||||||||| |||||||| Sbjct 1881 ACATGCTTGCGAGTGTTTGGGTGTCAAACCCGAACGCGCAATGAAAGTGAATGGAGGTGG 1940 Query 498 GAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 || || | ||||||||||||||||||| ||| | | |||||||||||||||||| Sbjct 1941 GATCC--GCAAGGTGCACCATCGACCGATCTGGATTTTCTAAGATGGATTTGAGTAAGAG 1998 Query 558 CATAGCTGTTGGG 570 || ||||||| Sbjct 1999 CAATTATGTTGGG 2011 >seq3354 Length=9634 Score = 149 bits (164), Expect = 3e-33 Identities = 213/291 (73%), Gaps = 18/291 (6%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| |||||||||||||||| ||||||| | |||||| | ||| | Sbjct 7040 CGACCCGTCTTGAAACACGGACCAAGGAGGCTAACATATGCGCGAGTCGAGGAGTGGAGA 7099 Query 464 AACCCGTGCGCGTAATGAAAGTGAACGGAG-----GTGGGAACCCGT-GAGG-GTGCAC- 515 ||| | |||||| ||||||||| | | ||| || ||| ||| |||||| Sbjct 7100 AACTCTATGGCGTAACGAAAGTGAAATGTGAGATTGTGCGA---CGTCGAGTCGTGCACG 7156 Query 516 CATCGACCGATC---CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGAC 572 |||| || || | | || || | | | |||||| |||| || || | | || Sbjct 7157 CATC-ACAGACCAGTCGGAAGTTTGACTACGA--TTGAGTTGGAGCGTATATGCTAGAAC 7213 Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||| ||||||||| |||| ||||| || | ||| || |||||| || |||||||| Sbjct 7214 CCGATAGATGGTGACCTATTCCTGAGCAGAGCGAATTCATTGGAAACAATGATGGAGGCT 7273 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 7274 CGTAGCGGTTCTGACGTGCAAATCGATCGTCAAACTTGGGTATAGGGGCGA 7324 >seq2506 Length=20947 Score = 149 bits (164), Expect = 3e-33 Identities = 213/291 (73%), Gaps = 18/291 (6%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| |||||||||||||||| ||||||| | |||||| | ||| | Sbjct 12607 CGACCCGTCTTGAAACACGGACCAAGGAGGCTAACATATGCGCGAGTCGAGGAGTGGAGA 12666 Query 464 AACCCGTGCGCGTAATGAAAGTGAACGGAG-----GTGGGAACCCGT-GAGG-GTGCAC- 515 ||| | |||||| ||||||||| | | ||| || ||| ||| |||||| Sbjct 12667 AACTCTATGGCGTAACGAAAGTGAAATGTGAGATTGTGCGA---CGTCGAGTCGTGCACG 12723 Query 516 CATCGACCGATC---CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGAC 572 |||| || || | | || || | | | |||||| |||| || || | | || Sbjct 12724 CATC-ACAGACCAGTCGGAAGTTTGACTACGA--TTGAGTTGGAGCGTATATGCTAGAAC 12780 Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||| ||||||||| |||| ||||| || | ||| || |||||| || |||||||| Sbjct 12781 CCGATAGATGGTGACCTATTCCTGAGCAGAGCGAATTCATTGGAAACAATGATGGAGGCT 12840 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 12841 CGTAGCGGTTCTGACGTGCAAATCGATCGTCAAACTTGGGTATAGGGGCGA 12891 Score = 149 bits (164), Expect = 3e-33 Identities = 213/291 (73%), Gaps = 18/291 (6%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| |||||||||||||||| ||||||| | |||||| | ||| | Sbjct 15180 CGACCCGTCTTGAAACACGGACCAAGGAGGCTAACATATGCGCGAGTCGAGGAGTGGAGA 15239 Query 464 AACCCGTGCGCGTAATGAAAGTGAACGGAG-----GTGGGAACCCGT-GAGG-GTGCAC- 515 ||| | |||||| ||||||||| | | ||| || ||| ||| |||||| Sbjct 15240 AACTCTATGGCGTAACGAAAGTGAAATGTGAGATTGTGCGA---CGTCGAGTCGTGCACG 15296 Query 516 CATCGACCGATC---CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGAC 572 |||| || || | | || || | | | |||||| |||| || || | | || Sbjct 15297 CATC-ACAGACCAGTCGGAAGTTTGACTACGA--TTGAGTTGGAGCGTATATGCTAGAAC 15353 Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||| ||||||||| |||| ||||| || | ||| || |||||| || |||||||| Sbjct 15354 CCGATAGATGGTGACCTATTCCTGAGCAGAGCGAATTCATTGGAAACAATGATGGAGGCT 15413 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 15414 CGTAGCGGTTCTGACGTGCAAATCGATCGTCAAACTTGGGTATAGGGGCGA 15464 Score = 149 bits (164), Expect = 3e-33 Identities = 213/291 (73%), Gaps = 18/291 (6%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| |||||||||||||||| ||||||| | |||||| | ||| | Sbjct 16794 CGACCCGTCTTGAAACACGGACCAAGGAGGCTAACATATGCGCGAGTCGAGGAGTGGAGA 16853 Query 464 AACCCGTGCGCGTAATGAAAGTGAACGGAG-----GTGGGAACCCGT-GAGG-GTGCAC- 515 ||| | |||||| ||||||||| | | ||| || ||| ||| |||||| Sbjct 16854 AACTCTATGGCGTAACGAAAGTGAAATGTGAGATTGTGCGA---CGTCGAGTCGTGCACG 16910 Query 516 CATCGACCGATC---CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGAC 572 |||| || || | | || || | | | |||||| |||| || || | | || Sbjct 16911 CATC-ACAGACCAGTCGGAAGTTTGACTACGA--TTGAGTTGGAGCGTATATGCTAGAAC 16967 Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||| ||||||||| |||| ||||| || | ||| || |||||| || |||||||| Sbjct 16968 CCGATAGATGGTGACCTATTCCTGAGCAGAGCGAATTCATTGGAAACAATGATGGAGGCT 17027 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 17028 CGTAGCGGTTCTGACGTGCAAATCGATCGTCAAACTTGGGTATAGGGGCGA 17078 Score = 118 bits (130), Expect = 4e-24 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||| | || |||| |||||| | | ||||| ||||||| Sbjct 12118 GAGTCGGATTGTTTGGGAATGCAGTCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 12177 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | |||||||||||| ||||||| |||| ||||| ||||||| | | || | Sbjct 12178 ATTACTCCGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGGTGAAAAGAATTCTGAGA 12237 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||| | | ||| |||||||| ||| |||||||| Sbjct 12238 AGAGAG-TGAGAAGAACGTGAAACCGTTAGTGGGGAAGCG 12276 Score = 118 bits (130), Expect = 4e-24 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||| | || |||| |||||| | | ||||| ||||||| Sbjct 14691 GAGTCGGATTGTTTGGGAATGCAGTCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 14750 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | |||||||||||| ||||||| |||| ||||| ||||||| | | || | Sbjct 14751 ATTACTCCGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGGTGAAAAGAATTCTGAGA 14810 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||| | | ||| |||||||| ||| |||||||| Sbjct 14811 AGAGAG-TGAGAAGAACGTGAAACCGTTAGTGGGGAAGCG 14849 Score = 118 bits (130), Expect = 4e-24 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||| | || |||| |||||| | | ||||| ||||||| Sbjct 16305 GAGTCGGATTGTTTGGGAATGCAGTCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 16364 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | |||||||||||| ||||||| |||| ||||| ||||||| | | || | Sbjct 16365 ATTACTCCGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGGTGAAAAGAATTCTGAGA 16424 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||| | | ||| |||||||| ||| |||||||| Sbjct 16425 AGAGAG-TGAGAAGAACGTGAAACCGTTAGTGGGGAAGCG 16463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079876512350