Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq2348 98.7 3e-18 >seq2348 Length=2703 Score = 98.7 bits (108), Expect = 3e-18 Identities = 197/282 (70%), Gaps = 10/282 (4%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGA-GACAGCGCCGC 65 || || |||||| ||| | | ||||||||||| | | ||| | | ||||||| | Sbjct 1857 TAAACCGCATCTGCACGGTTAATTCAATTTCACCG-GACTCAAATTTAAGACAGCGAGGG 1799 Query 66 CATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125 |||| | |||||| |||||| | | | ||| | | |||||||||||| ||||||||| Sbjct 1798 CATCAGTGTTCCATTCATGCAGGACCGTAATTAGCGGCCAAGGAATTTCGTTACCTTAGG 1739 Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGA---TCAAGAGCTTCGCG-TTAG 181 | | |||| |||| | ||| | || | | | |||| | | | ||| ||| ||| Sbjct 1738 ATCCTTATAGTTAAGACCGTCATTGATCAGTACTTCAAACCCCGATTACTT-GCGATTAA 1680 Query 182 CTAA-CCCCATCAATTA-ACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 | || ||| | || | || | | || ||| |||| ||||| |||||||| ||||| Sbjct 1679 CAAATAACCAGTAGCTATATCTCCTGACATCGGACAGGAATCACAACCTATACGACCACT 1620 Query 240 -TTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCA 280 || ||||| |||| ||||||||||| |||||||| ||| Sbjct 1619 GTTAGTGTTAGCAGGCTGCTGTGTTTTAGGTAAACAGTTGCA 1578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260727415744