Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq5161 360 3e-97 seq2506 116 6e-24 >seq5161 Length=2011 Score = 360 bits (398), Expect = 3e-97 Identities = 234/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 323 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 264 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| ||| | || ||||||||||||||||| |||| Sbjct 263 CCTGTTATTGCCTCAAACTTCCATCAGCTAAACGCTGATAGTCCCTCTAAGAAGACAGCA 204 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| ||| || || || |||||||||||||||||||||||||||||||||||||||| Sbjct 203 GCCAGCCAAAGCCGGCTGGTCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 144 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct 143 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAGATCAAGAA 84 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 83 AGAGCTATCAATCTGTC 67 >seq2506 Length=20947 Score = 116 bits (128), Expect = 6e-24 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 || ||| |||||||||||||| || |||| | |||| |||||||||| |||||||||| Sbjct 10516 AGATTATGGTCTCGTTCGTTACCGCGATTAGGCCGACAGATCACTCCACGAACTAAGAAC 10457 Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 |||||||||||||||| ||| | |||| |||||||||| |||||| Sbjct 10456 GGCCATGCACCACCACTCATCGCATCATAAAAGAGCTATTGATCTGT 10410 Score = 109 bits (120), Expect = 9e-22 Identities = 83/98 (85%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 || ||| |||||||||||||| || |||| | |||| |||||||||| |||||||||| Sbjct 13089 AGATTATGGTCTCGTTCGTTACCGCGATTAGGCCGACAGATCACTCCACGAACTAAGAAC 13030 Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||||||||||||||| ||| | |||| ||||||||| Sbjct 13029 GGCCATGCACCACCACTCATCGCATCATAAAAGAGCTA 12992 Score = 78.8 bits (86), Expect = 1e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 ||| |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||| Sbjct 10796 TCATTGTAGCGCGCGTGCAGCCCTGAACATCGAAGGGCATCACTGACCTGTTATAGCC 10739 Score = 78.8 bits (86), Expect = 1e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 ||| |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||| Sbjct 13369 TCATTGTAGCGCGCGTGCAGCCCTGAACATCGAAGGGCATCACTGACCTGTTATAGCC 13312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796755561717