Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2506 279 9e-73 seq4203 104 4e-20 >seq2506 Length=20947 Score = 279 bits (308), Expect = 9e-73 Identities = 210/245 (86%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 52 CCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111 ||||||||| |||||||||||||||||||||||||||| || ||||||||||||| || Sbjct 19512 CCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGA-AGCGGGTGAACAATCCGAC 19454 Query 112 GCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 171 ||| | | ||||| | |||||||||||||||||||||||||||||||||||| | Sbjct 19453 ACTTTGAGTACGCTGCTGCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGA 19394 Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 19393 CGTCGCTATGGGCGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACAC 19334 Query 232 CTCTAGCCTCAAATTTCGAGGGA---CTAAAGGATCGATAGGCCACACTTTCATGGTTTG 288 ||||| ||| ||| | ||| | |||||||||| |||||||||||||| ||||||| Sbjct 19333 CTCTATCCTGAAACTCTCAGGCAAACATAAAGGATCGTTAGGCCACACTTTCGTGGTTTG 19274 Query 289 TATTC 293 ||||| Sbjct 19273 TATTC 19269 >seq4203 Length=11162 Score = 104 bits (114), Expect = 4e-20 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||| | |||||||||||||||||||||||||||| || Sbjct 315 CAGTAGGGTAAAACTAACCTGTCTTACGACGGTCTAAACCCAGCTCACGTTCCCT-GAAG 257 Query 95 TGGGTGAACAATCC 108 ||||||||||||| Sbjct 256 CGGGTGAACAATCC 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854350812192