Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq2348 104 6e-20 seq2506 86.0 2e-14 >seq2348 Length=2703 Score = 104 bits (114), Expect = 6e-20 Identities = 148/204 (73%), Gaps = 7/204 (3%) Strand=Plus/Minus Query 186 TTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAG 245 |||||| | | | ||||| ||||||||||||| ||||||||||| ||| || | Sbjct 575 TTGCCAGTAACATTAAGTTGCTGACCCATTATGCAAAAGGTACGACATCAG--AAGTTAA 518 Query 246 TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305 | ||| |||||| || | ||| |||||| |||||||||| | || || Sbjct 517 TC--CTCTGTCTGCTTATAGGACTACTAGTTCAGGCTCTATTTCAC--CAGTCATCGACT 462 Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365 ||||| || |||||||||||||||| |||||||||| | | | | || |||||| Sbjct 461 TTCTTATCATTTTTCCCTCACGGTACTC-TTCACTATCGCTGAATGTATCATACTTAGCC 403 Query 366 TTGGAGGATGGTCCCCCCATATTC 389 |||||||||||| ||||| ||||| Sbjct 402 TTGGAGGATGGTTCCCCCTTATTC 379 >seq2506 Length=20947 Score = 86.0 bits (94), Expect = 2e-14 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | ||| | |||||| | |||| | |||||||| ||||||||||||||| Sbjct 12263 ACGGTTTCACGTTCT-TCTCACTCTCTTCTCAGAA-TTCTTTTCACCTTTCCCTCACGGT 12206 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| ||| ||||||||| |||| ||||||||||| || Sbjct 12205 ACTTGTTTGCTATCGGTCTCGGAGTAATATTTAGCCTTAGA 12165 Score = 86.0 bits (94), Expect = 2e-14 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | ||| | |||||| | |||| | |||||||| ||||||||||||||| Sbjct 14836 ACGGTTTCACGTTCT-TCTCACTCTCTTCTCAGAA-TTCTTTTCACCTTTCCCTCACGGT 14779 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| ||| ||||||||| |||| ||||||||||| || Sbjct 14778 ACTTGTTTGCTATCGGTCTCGGAGTAATATTTAGCCTTAGA 14738 Score = 86.0 bits (94), Expect = 2e-14 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | ||| | |||||| | |||| | |||||||| ||||||||||||||| Sbjct 16450 ACGGTTTCACGTTCT-TCTCACTCTCTTCTCAGAA-TTCTTTTCACCTTTCCCTCACGGT 16393 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| ||| ||||||||| |||| ||||||||||| || Sbjct 16392 ACTTGTTTGCTATCGGTCTCGGAGTAATATTTAGCCTTAGA 16352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241528521088