Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5161 430 2e-118 seq2506 143 5e-32 >seq5161 Length=2011 Score = 430 bits (476), Expect = 2e-118 Identities = 282/310 (91%), Gaps = 1/310 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||| | ||| |||||||| || || | |||||||| Sbjct 158 GAACGAGACCTTAACCTGCTAAATAGACCAGCCGGCTTTGGCTGGCTGCTGTCTTCTTAG 217 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| || | ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 218 AGGGACTATCAGCGTTTAGCTGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 277 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||| Sbjct 278 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTCTACCACCTTGGCC 337 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 |||||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||||| Sbjct 338 GGAAGGCCTGGGTAATCTTGTGAAACTCTGTCGTGATGGGGATAGAACATTGCAATTATT 397 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 | ||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 398 GTTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 457 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 458 GCCCTTTGTA 467 >seq2506 Length=20947 Score = 143 bits (158), Expect = 5e-32 Identities = 162/216 (75%), Gaps = 7/216 (3%) Strand=Plus/Plus Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 ||| |||||||||| ||||||||||| ||||||| |||| |||||||||||||| ||| | Sbjct 10739 GGCTATAACAGGTCAGTGATGCCCTTCGATGTTCAGGGCTGCACGCGCGCTACAATGATA 10798 Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232 | |||||||| || | || ||| |||||||||| |||| | | |||| Sbjct 10799 ACGACAACGAGT-----GTCTGCGTCGAAAGACGTGGGTAATCT--TTAATCGTTATCGT 10851 Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292 | ||||||| || | ||| || | | | || | || ||||||| ||||||| ||| | | Sbjct 10852 GATGGGGATTGACCGTTGTAACTGTCGGTCATGAAAGAGGAATCCCTAGTATGCGTATTT 10911 Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || || | ||| ||||| |||||||||||||||| Sbjct 10912 TATTAGAATGCGCAGATTAAGTCCCTGCCCTTTGTA 10947 Score = 143 bits (158), Expect = 5e-32 Identities = 162/216 (75%), Gaps = 7/216 (3%) Strand=Plus/Plus Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 ||| |||||||||| ||||||||||| ||||||| |||| |||||||||||||| ||| | Sbjct 13312 GGCTATAACAGGTCAGTGATGCCCTTCGATGTTCAGGGCTGCACGCGCGCTACAATGATA 13371 Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232 | |||||||| || | || ||| |||||||||| |||| | | |||| Sbjct 13372 ACGACAACGAGT-----GTCTGCGTCGAAAGACGTGGGTAATCT--TTAATCGTTATCGT 13424 Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292 | ||||||| || | ||| || | | | || | || ||||||| ||||||| ||| | | Sbjct 13425 GATGGGGATTGACCGTTGTAACTGTCGGTCATGAAAGAGGAATCCCTAGTATGCGTATTT 13484 Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || || | ||| ||||| |||||||||||||||| Sbjct 13485 TATTAGAATGCGCAGATTAAGTCCCTGCCCTTTGTA 13520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947145469696