Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2506 426 5e-117 >seq2506 Length=20947 Score = 426 bits (472), Expect = 5e-117 Identities = 310/362 (86%), Gaps = 13/362 (4%) Strand=Plus/Minus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-------------CCGA 231 |||| |||||| |||||||||| || |||||||||||| ||| || | Sbjct 18849 GATTGAGTAAAGAAACGATAAGAGTGGTGGTATTTCACCGGCGAAACCTGGGTTGCCCCA 18790 Query 232 AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAG 291 || ||||||| |||||||| ||||||| ||| |||| | || |||||||||||| Sbjct 18789 AATCTCTCCCACCTATTCTACGCCTCTCATGTCTCCTCACCATATCAAACTAGAGTCAAG 18730 Query 292 CTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 351 |||||||||||||||||||||||||| || | |||||||||||||||| |||| ||| Sbjct 18729 CTCAACAGGGTCTTCTTTCCCCGCTGTCTCAGTCAAGCCCGTTCCCTTGACTGTTTGTTC 18670 Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 ||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 18669 GCTAGATGGTAGGTAGGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATT 18610 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 18609 AGATGACGAGGCATTTGGCTATCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 18550 Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||||||| | || ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 18549 CTTGGTTGTGTCTCCACACTTTGACATTCAGAGCACTGGGCAGAATTCACATTGCGTCAA 18490 Query 532 CA 533 || Sbjct 18489 CA 18488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635105861536