Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2506 289 9e-76 >seq2506 Length=20947 Score = 289 bits (320), Expect = 9e-76 Identities = 357/478 (75%), Gaps = 29/478 (6%) Strand=Plus/Minus Query 41 AGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 100 |||| || | |||| |||||| |||| |||||||||||||||||||||| |||||| Sbjct 9537 AGTAATTCTCTTCACCACCTCCTACTGTCTAGATTGGGTAATTTGCGCGCCTGTTGCCTT 9478 Query 101 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 9477 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGT 9418 Query 161 TACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220 ||||||||| ||| ||||| |||| || | ||||| | |||||||||||||||||| | Sbjct 9417 TACCCGTTGCAACCTTGGTAAGCCAATACCTTACCAAC--AAGTTGATAGGGCAGAAACT 9360 Query 221 TGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATC-----A 275 | |||| | |||||||| | ||||||| |||| | ||||||| || || | Sbjct 9359 CAATTGAAACGTCGCCGGCACTAGGCCATACGATCAGCAAAGTTATCTAGATTCCCCTTA 9300 Query 276 CCAAG-GAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATAC---ACCCCTTCCGAAG 331 | | | |||| | | | ||| ||| |||||||||| | | | ||||||| Sbjct 9299 CTATGCGAGC----ATAGTAGATGG--TTTAGTCTAATAAATGCTTTGACTCGTCCGAAG 9246 Query 332 TCGGGGTTTTTA---GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGG 388 || | | | ||| |||||||||||||| || ||||||||||||| | || Sbjct 9245 ACGAGCCAATGAACTGCACGTATTAGCTCTAGATTTCCCACGGTTATCCA--ATGGGAGA 9188 Query 389 TACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTG 448 || |||||| | | || |||||| || |||||| | |||||| |||| || | | Sbjct 9187 GACAATCAAACAGATTATCACTGATATACTGAGCCGTCCGCAGTCTCAC---GTAAAACG 9131 Query 449 CTTATACTTAG-ACATGCATGGCTTAATCTTTGAGACAAGCATATGACT-ACTGGCAG 504 || |||| | |||| |||||||||||||| |||| ||| || || |||||||| Sbjct 9130 TTTGAACTTGGCACATACATGGCTTAATCTTCGAGAATAGC--TTGCCTGACTGGCAG 9075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510313046272