Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1377 113 3e-23 seq1367 113 3e-23 seq1025 113 3e-23 >seq1377 Length=314745 Score = 113 bits (124), Expect = 3e-23 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | ||||||||| | |||||| || |||||| | | Sbjct 8614 GAACCCAAAATCTTTGGTTTCCCTTAAGGTGCCAATGGAGTCATAAA-ATAACACCCACT 8672 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||| |||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct 8673 GATCCCTAGACGGCATCGTTTATGGTTAGAACTACAACGGTATCTGATCGTCTTCGA 8729 Score = 113 bits (124), Expect = 3e-23 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | ||||||||| | |||||| || |||||| | | Sbjct 114987 GAACCCAAAATCTTTGGTTTCCCTTAAGGTGCCAATGGAGTCATAAA-ATAACACCCACT 114929 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||| |||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct 114928 GATCCCTAGACGGCATCGTTTATGGTTAGAACTACAACGGTATCTGATCGTCTTCGA 114872 Score = 113 bits (124), Expect = 3e-23 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | ||||||||| | |||||| || |||||| | | Sbjct 306536 GAACCCAAAATCTTTGGTTTCCCTTAAGGTGCCAATGGAGTCATAAA-ATAACACCCACT 306594 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||| |||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct 306595 GATCCCTAGACGGCATCGTTTATGGTTAGAACTACAACGGTATCTGATCGTCTTCGA 306651 >seq1367 Length=51388 Score = 113 bits (124), Expect = 3e-23 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | ||||||||| | |||||| || |||||| | | Sbjct 4031 GAACCCAAAATCTTTGGTTTCCCTTAAGGTGCCAATGGAGTCATAAA-ATAACACCCACT 4089 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||| |||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct 4090 GATCCCTAGACGGCATCGTTTATGGTTAGAACTACAACGGTATCTGATCGTCTTCGA 4146 >seq1025 Length=4694 Score = 113 bits (124), Expect = 3e-23 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | ||||||||| | |||||| || |||||| | | Sbjct 1864 GAACCCAAAATCTTTGGTTTCCCTTAAGGTGCCAATGGAGTCATAAA-ATAACACCCACT 1922 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||| |||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct 1923 GATCCCTAGACGGCATCGTTTATGGTTAGAACTACAACGGTATCTGATCGTCTTCGA 1979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278396309460