Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1394 389 7e-106 seq1377 389 7e-106 seq1367 389 7e-106 seq1083 358 1e-96 seq1383 349 6e-94 seq1296 349 6e-94 >seq1394 Length=981283 Score = 389 bits (430), Expect = 7e-106 Identities = 263/295 (89%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| ||||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 17648 TACTGAGCAGAATTACTATCACGACGACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 17707 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 17708 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGA 17767 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17768 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 17827 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | Sbjct 17828 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACACCTCTAGCTT 17887 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 | | | | |||||||||||||||||||| |||||| |||||||||||| Sbjct 17888 AATACTCATAAAAACTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTCAC 17942 >seq1377 Length=314745 Score = 389 bits (430), Expect = 7e-106 Identities = 263/295 (89%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| ||||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 119186 TACTGAGCAGAATTACTATCACGACGACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 119127 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 119126 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGA 119067 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 119066 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 119007 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | Sbjct 119006 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACACCTCTAGCTT 118947 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 | | | | |||||||||||||||||||| |||||| |||||||||||| Sbjct 118946 AATACTCATAAAAACTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTCAC 118892 Score = 336 bits (372), Expect = 4e-90 Identities = 221/244 (91%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 52 CCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3739 CCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 3798 Query 112 GCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 171 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 3799 GCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 3858 Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 3859 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACAC 3918 Query 232 CTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291 ||||||| | | | | | |||||||||||||||||||| |||||| |||||||| Sbjct 3919 CTCTAGCTTAATACTCATAAAAACTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTAT 3978 Query 292 TCAC 295 |||| Sbjct 3979 TCAC 3982 Score = 255 bits (282), Expect = 1e-65 Identities = 165/181 (91%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| ||||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 134428 TACTGAGCAGAATTACTATCACGACGACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 134369 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 134368 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGA 134309 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134308 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 134249 Query 181 G 181 | Sbjct 134248 G 134248 >seq1367 Length=51388 Score = 389 bits (430), Expect = 7e-106 Identities = 263/295 (89%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| ||||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 83 TACTGAGCAGAATTACTATCACGACGACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 142 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 143 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGA 202 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 203 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 262 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | Sbjct 263 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACACCTCTAGCTT 322 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 | | | | |||||||||||||||||||| |||||| |||||||||||| Sbjct 323 AATACTCATAAAAACTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTCAC 377 >seq1083 Length=6820 Score = 358 bits (396), Expect = 1e-96 Identities = 240/268 (90%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| ||||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 6553 TACTGAGCAGAATTACTATCACGACGACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 6612 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 6613 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGA 6672 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6673 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 6732 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | Sbjct 6733 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACACCTCTAGCTT 6792 Query 241 CAAATTTCGAGGGACTAAAGGATCGATA 268 | | | | ||||||||||||||| Sbjct 6793 AATACTCATAAAAACTAAAGGATCGATA 6820 >seq1383 Length=478585 Score = 349 bits (386), Expect = 6e-94 Identities = 220/238 (92%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| ||||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 32006 TACTGAGCAGAATTACTATCACGACGACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 31947 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 31946 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGA 31887 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31886 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 31827 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 31826 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACACCTCTAGC 31769 >seq1296 Length=13798 Score = 349 bits (386), Expect = 6e-94 Identities = 220/238 (92%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| ||||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 262 TACTGAGCAGAATTACTATCACGACGACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 203 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 202 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGA 143 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 142 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 83 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 82 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACACCTCTAGC 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854387918784