Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1377 93.3 3e-17 seq1367 93.3 3e-17 >seq1377 Length=314745 Score = 93.3 bits (102), Expect = 3e-17 Identities = 79/91 (87%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 34 CCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTA 93 ||||| ||||| | |||||||| |||| || ||||||||| ||||||||||| ||||| Sbjct 8039 CCAAT-CCGAA-GACCTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTA 8094 Query 94 CAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||||||| |||||| |||| Sbjct 8095 CAAAGGGCAGGGACGTAAT-CAACGCGAGCT 8124 Score = 93.3 bits (102), Expect = 3e-17 Identities = 79/91 (87%), Gaps = 5/91 (5%) Strand=Plus/Minus Query 34 CCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTA 93 ||||| ||||| | |||||||| |||| || ||||||||| ||||||||||| ||||| Sbjct 115562 CCAAT-CCGAA-GACCTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTA 115507 Query 94 CAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||||||| |||||| |||| Sbjct 115506 CAAAGGGCAGGGACGTAAT-CAACGCGAGCT 115477 Score = 93.3 bits (102), Expect = 3e-17 Identities = 79/91 (87%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 34 CCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTA 93 ||||| ||||| | |||||||| |||| || ||||||||| ||||||||||| ||||| Sbjct 305961 CCAAT-CCGAA-GACCTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTA 306016 Query 94 CAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||||||| |||||| |||| Sbjct 306017 CAAAGGGCAGGGACGTAAT-CAACGCGAGCT 306046 >seq1367 Length=51388 Score = 93.3 bits (102), Expect = 3e-17 Identities = 79/91 (87%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 34 CCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTA 93 ||||| ||||| | |||||||| |||| || ||||||||| ||||||||||| ||||| Sbjct 3456 CCAAT-CCGAA-GACCTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTA 3511 Query 94 CAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||||||| |||||| |||| Sbjct 3512 CAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300796012520