Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1377 127 2e-27 seq1025 120 4e-25 seq1367 114 2e-23 >seq1377 Length=314745 Score = 127 bits (140), Expect = 2e-27 Identities = 144/188 (77%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | |||||||| |||||||||||||| | |||||| ||| Sbjct 8877 AAACCAACAAAATAGA-ACCAAAGTCCTATTTTATTATTCCATGCTCAGGTATTCAAGCG 8935 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC- 128 |||||||||||||||||||||||| ||| ||||||||| | |||| | ||||| Sbjct 8936 ATGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCTTAAGTCCTACACACACT 8995 Query 129 CAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGA 187 |||| ||| ||||| | | ||||| | || | | || |||||||| |||| | Sbjct 8996 CAATTAAGAGCATATGCAGCCCTCAAGAAGAAGAAC-AAATCATCCAGTACTCACCGTTA 9054 Query 188 GGCGGACC 195 |||||||| Sbjct 9055 GGCGGACC 9062 Score = 127 bits (140), Expect = 2e-27 Identities = 144/188 (77%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | |||||||| |||||||||||||| | |||||| ||| Sbjct 114724 AAACCAACAAAATAGA-ACCAAAGTCCTATTTTATTATTCCATGCTCAGGTATTCAAGCG 114666 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC- 128 |||||||||||||||||||||||| ||| ||||||||| | |||| | ||||| Sbjct 114665 ATGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCTTAAGTCCTACACACACT 114606 Query 129 CAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGA 187 |||| ||| ||||| | | ||||| | || | | || |||||||| |||| | Sbjct 114605 CAATTAAGAGCATATGCAGCCCTCAAGAAGAAGAAC-AAATCATCCAGTACTCACCGTTA 114547 Query 188 GGCGGACC 195 |||||||| Sbjct 114546 GGCGGACC 114539 Score = 127 bits (140), Expect = 2e-27 Identities = 144/188 (77%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | |||||||| |||||||||||||| | |||||| ||| Sbjct 306799 AAACCAACAAAATAGA-ACCAAAGTCCTATTTTATTATTCCATGCTCAGGTATTCAAGCG 306857 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC- 128 |||||||||||||||||||||||| ||| ||||||||| | |||| | ||||| Sbjct 306858 ATGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCTTAAGTCCTACACACACT 306917 Query 129 CAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGA 187 |||| ||| ||||| | | ||||| | || | | || |||||||| |||| | Sbjct 306918 CAATTAAGAGCATATGCAGCCCTCAAGAAGAAGAAC-AAATCATCCAGTACTCACCGTTA 306976 Query 188 GGCGGACC 195 |||||||| Sbjct 306977 GGCGGACC 306984 >seq1025 Length=4694 Score = 120 bits (132), Expect = 4e-25 Identities = 141/187 (75%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | |||||||| |||||||||||||| | |||||| ||| Sbjct 2127 AAACCAACAAAATAGA-ACCAAAGTCCTATTTTATTATTCCATGCTCAGGTATTCAAGCG 2185 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC- 128 |||||||||||||||||||||||| ||| ||||||||| |||| | ||||| Sbjct 2186 ATGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCTCAAGTCCTACACACACT 2245 Query 129 CAATGAAGGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAG 188 |||| | ||||| | | ||||| | || | | || |||||||| |||| || Sbjct 2246 CAATTAGAGCATATGCAGCCCTCAAGAAGAAGAAC-AAATCATCCAGTACTCACCGTTAG 2304 Query 189 GCGGACC 195 ||||||| Sbjct 2305 GCGGACC 2311 >seq1367 Length=51388 Score = 114 bits (126), Expect = 2e-23 Identities = 108/134 (81%), Gaps = 3/134 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | |||||||| |||||||||||||| | |||||| ||| Sbjct 4294 AAACCAACAAAATAGA-ACCAAAGTCCTATTTTATTATTCCATGCTCAGGTATTCAAGCG 4352 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC- 128 |||||||||||||||||||||||| ||| ||||||||| |||| | ||||| Sbjct 4353 ATGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCTCAAGTCCTACACACACT 4412 Query 129 CAATGAAG-GCATA 141 |||| ||| ||||| Sbjct 4413 CAATTAAGAGCATA 4426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595191846876