Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1377 246 6e-63 seq1367 246 6e-63 >seq1377 Length=314745 Score = 246 bits (272), Expect = 6e-63 Identities = 212/258 (82%), Gaps = 7/258 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| || ||| | |||| | | |||| | || |||||||||||||| Sbjct 8344 CTTCTTAGAGGGACAATTGGCGTTTAGCCAAAGTAAGTAGG--GCCATAACAGGTCTGTG 8287 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || |||| | | Sbjct 8286 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGGCAGAGAGTCCTGCT 8227 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | | || |||| || ||||||| | ||||| |||||||||||||||| | ||| Sbjct 8226 ACA---CTGGGAGGTGCGGCTAATCTT-TCAAACTTCATCGTGCTGGGGATAGACCCTTG 8171 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| |||| |||||||||| ||||||||||||| ||||||||| |||||||||| Sbjct 8170 TAATTATTGGTCTTGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATT 8111 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 8110 ACGTCCCTGCCCTTTGTA 8093 Score = 246 bits (272), Expect = 6e-63 Identities = 212/258 (82%), Gaps = 7/258 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| || ||| | |||| | | |||| | || |||||||||||||| Sbjct 115257 CTTCTTAGAGGGACAATTGGCGTTTAGCCAAAGTAAGTAGG--GCCATAACAGGTCTGTG 115314 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || |||| | | Sbjct 115315 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGGCAGAGAGTCCTGCT 115374 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | | || |||| || ||||||| | ||||| |||||||||||||||| | ||| Sbjct 115375 ACA---CTGGGAGGTGCGGCTAATCTT-TCAAACTTCATCGTGCTGGGGATAGACCCTTG 115430 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| |||| |||||||||| ||||||||||||| ||||||||| |||||||||| Sbjct 115431 TAATTATTGGTCTTGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATT 115490 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 115491 ACGTCCCTGCCCTTTGTA 115508 Score = 246 bits (272), Expect = 6e-63 Identities = 212/258 (82%), Gaps = 7/258 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| || ||| | |||| | | |||| | || |||||||||||||| Sbjct 306266 CTTCTTAGAGGGACAATTGGCGTTTAGCCAAAGTAAGTAGG--GCCATAACAGGTCTGTG 306209 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || |||| | | Sbjct 306208 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGGCAGAGAGTCCTGCT 306149 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | | || |||| || ||||||| | ||||| |||||||||||||||| | ||| Sbjct 306148 ACA---CTGGGAGGTGCGGCTAATCTT-TCAAACTTCATCGTGCTGGGGATAGACCCTTG 306093 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| |||| |||||||||| ||||||||||||| ||||||||| |||||||||| Sbjct 306092 TAATTATTGGTCTTGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATT 306033 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 306032 ACGTCCCTGCCCTTTGTA 306015 >seq1367 Length=51388 Score = 246 bits (272), Expect = 6e-63 Identities = 212/258 (82%), Gaps = 7/258 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| || ||| | |||| | | |||| | || |||||||||||||| Sbjct 3761 CTTCTTAGAGGGACAATTGGCGTTTAGCCAAAGTAAGTAGG--GCCATAACAGGTCTGTG 3704 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || |||| | | Sbjct 3703 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGGCAGAGAGTCCTGCT 3644 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | | || |||| || ||||||| | ||||| |||||||||||||||| | ||| Sbjct 3643 ACA---CTGGGAGGTGCGGCTAATCTT-TCAAACTTCATCGTGCTGGGGATAGACCCTTG 3588 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| |||| |||||||||| ||||||||||||| ||||||||| |||||||||| Sbjct 3587 TAATTATTGGTCTTGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATT 3528 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 3527 ACGTCCCTGCCCTTTGTA 3510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947186606592